Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC21.2■□□□□ 0.98
ATF3P18847 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ATF3P18847 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
ATF3P18847 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ATF3P18847 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATF3P18847 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ATF3P18847 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ATF3P18847 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC21.2■□□□□ 0.98
ATF3P18847 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC21.2■□□□□ 0.98
ATF3P18847 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATF3P18847 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATF3P18847 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC21.2■□□□□ 0.98
ATF3P18847 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATF3P18847 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
ATF3P18847 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATF3P18847 CYP51A1P3-201ENST00000400072 1428 ntBASIC21.2■□□□□ 0.98
ATF3P18847 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.2■□□□□ 0.98
ATF3P18847 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATF3P18847 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATF3P18847 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATF3P18847 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
ATF3P18847 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC21.19■□□□□ 0.98
ATF3P18847 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATF3P18847 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATF3P18847 F11R-206ENST00000621309 4770 ntTSL 5 BASIC21.19■□□□□ 0.98
ATF3P18847 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC21.19■□□□□ 0.98
ATF3P18847 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATF3P18847 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATF3P18847 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATF3P18847 HNRNPA1P41-201ENST00000397777 928 ntBASIC21.19■□□□□ 0.98
ATF3P18847 AC234644.1-201ENST00000406065 370 ntBASIC21.19■□□□□ 0.98
ATF3P18847 PFN2-205ENST00000461868 613 ntTSL 2 BASIC21.19■□□□□ 0.98
ATF3P18847 EHF-205ENST00000527935 557 ntTSL 2 BASIC21.19■□□□□ 0.98
ATF3P18847 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC21.19■□□□□ 0.98
ATF3P18847 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATF3P18847 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATF3P18847 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC21.19■□□□□ 0.98
ATF3P18847 NAP1L6-202ENST00000641404 1222 ntBASIC21.19■□□□□ 0.98
ATF3P18847 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
ATF3P18847 FLII-221ENST00000578558 2377 ntTSL 5 BASIC21.19■□□□□ 0.98
ATF3P18847 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATF3P18847 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC21.19■□□□□ 0.98
ATF3P18847 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
ATF3P18847 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC21.19■□□□□ 0.98
ATF3P18847 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATF3P18847 AR-207ENST00000612010 3896 ntTSL 5 BASIC21.19■□□□□ 0.98
ATF3P18847 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
ATF3P18847 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC21.19■□□□□ 0.98
ATF3P18847 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATF3P18847 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATF3P18847 ACE-204ENST00000428043 5120 ntTSL 2 BASIC21.18■□□□□ 0.98
ATF3P18847 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATF3P18847 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATF3P18847 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATF3P18847 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATF3P18847 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATF3P18847 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
ATF3P18847 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ATF3P18847 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
ATF3P18847 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATF3P18847 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATF3P18847 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATF3P18847 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC21.18■□□□□ 0.98
ATF3P18847 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC21.18■□□□□ 0.98
ATF3P18847 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATF3P18847 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC21.18■□□□□ 0.98
ATF3P18847 PTK2-225ENST00000520892 571 ntTSL 4 BASIC21.18■□□□□ 0.98
ATF3P18847 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC21.18■□□□□ 0.98
ATF3P18847 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC21.18■□□□□ 0.98
ATF3P18847 MIR4754-201ENST00000582477 89 ntBASIC21.18■□□□□ 0.98
ATF3P18847 IRF3-215ENST00000596822 823 ntTSL 3 BASIC21.18■□□□□ 0.98
ATF3P18847 AC138466.3-201ENST00000619983 221 ntBASIC21.18■□□□□ 0.98
ATF3P18847 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
ATF3P18847 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATF3P18847 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC21.18■□□□□ 0.98
ATF3P18847 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
ATF3P18847 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ATF3P18847 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATF3P18847 ME2P1-201ENST00000426028 1970 ntBASIC21.17■□□□□ 0.98
ATF3P18847 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
ATF3P18847 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
ATF3P18847 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATF3P18847 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATF3P18847 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATF3P18847 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATF3P18847 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATF3P18847 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATF3P18847 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATF3P18847 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC21.17■□□□□ 0.98
ATF3P18847 PFN2-202ENST00000423691 911 ntTSL 2 BASIC21.17■□□□□ 0.98
ATF3P18847 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC21.17■□□□□ 0.98
ATF3P18847 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC21.17■□□□□ 0.98
ATF3P18847 AL160314.3-201ENST00000556041 767 ntBASIC21.17■□□□□ 0.98
ATF3P18847 AC100827.2-201ENST00000563214 1194 ntBASIC21.17■□□□□ 0.98
ATF3P18847 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
ATF3P18847 MIR6756-201ENST00000616240 63 ntBASIC21.17■□□□□ 0.98
ATF3P18847 AL603764.1-201ENST00000636452 321 ntBASIC21.17■□□□□ 0.98
ATF3P18847 TBC1D3J-201ENST00000620719 1426 ntBASIC21.17■□□□□ 0.98
ATF3P18847 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
ATF3P18847 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms