Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.44■□□□□ 0.54
TOP1P11387 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TOP1P11387 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TOP1P11387 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.44■□□□□ 0.54
TOP1P11387 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.44■□□□□ 0.54
TOP1P11387 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.44■□□□□ 0.54
TOP1P11387 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.44■□□□□ 0.54
TOP1P11387 MYCLP2-201ENST00000449268 967 ntBASIC18.44■□□□□ 0.54
TOP1P11387 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TOP1P11387 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.44■□□□□ 0.54
TOP1P11387 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.44■□□□□ 0.54
TOP1P11387 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.44■□□□□ 0.54
TOP1P11387 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.44■□□□□ 0.54
TOP1P11387 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.44■□□□□ 0.54
TOP1P11387 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.44■□□□□ 0.54
TOP1P11387 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.44■□□□□ 0.54
TOP1P11387 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TOP1P11387 AC010491.1-201ENST00000563101 2797 ntBASIC18.44■□□□□ 0.54
TOP1P11387 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TOP1P11387 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TOP1P11387 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TOP1P11387 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TOP1P11387 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.44■□□□□ 0.54
TOP1P11387 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TOP1P11387 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TOP1P11387 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
TOP1P11387 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TOP1P11387 ANKRD26P3-201ENST00000454044 2748 ntBASIC18.43■□□□□ 0.54
TOP1P11387 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TOP1P11387 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC18.43■□□□□ 0.54
TOP1P11387 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TOP1P11387 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TOP1P11387 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.43■□□□□ 0.54
TOP1P11387 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.43■□□□□ 0.54
TOP1P11387 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
TOP1P11387 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TOP1P11387 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TOP1P11387 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TOP1P11387 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
TOP1P11387 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
TOP1P11387 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TOP1P11387 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TOP1P11387 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TOP1P11387 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TOP1P11387 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.43■□□□□ 0.54
TOP1P11387 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.43■□□□□ 0.54
TOP1P11387 AC098850.1-201ENST00000419919 790 ntBASIC18.43■□□□□ 0.54
TOP1P11387 RN7SL399P-201ENST00000471648 279 ntBASIC18.43■□□□□ 0.54
TOP1P11387 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.43■□□□□ 0.54
TOP1P11387 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.43■□□□□ 0.54
TOP1P11387 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.43■□□□□ 0.54
TOP1P11387 WASH4P-201ENST00000564273 1246 ntBASIC18.43■□□□□ 0.54
TOP1P11387 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.43■□□□□ 0.54
TOP1P11387 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TOP1P11387 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TOP1P11387 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.43■□□□□ 0.54
TOP1P11387 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TOP1P11387 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.43■□□□□ 0.54
TOP1P11387 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.43■□□□□ 0.54
TOP1P11387 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TOP1P11387 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TOP1P11387 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TOP1P11387 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.43■□□□□ 0.54
TOP1P11387 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.43■□□□□ 0.54
TOP1P11387 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TOP1P11387 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TOP1P11387 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TOP1P11387 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.43■□□□□ 0.54
TOP1P11387 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TOP1P11387 AC092384.3-202ENST00000564646 2873 ntBASIC18.43■□□□□ 0.54
TOP1P11387 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TOP1P11387 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TOP1P11387 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.43■□□□□ 0.54
TOP1P11387 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.42■□□□□ 0.54
TOP1P11387 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TOP1P11387 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TOP1P11387 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
TOP1P11387 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
TOP1P11387 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
TOP1P11387 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.42■□□□□ 0.54
TOP1P11387 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TOP1P11387 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.42■□□□□ 0.54
TOP1P11387 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TOP1P11387 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TOP1P11387 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TOP1P11387 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TOP1P11387 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TOP1P11387 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TOP1P11387 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TOP1P11387 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.42■□□□□ 0.54
TOP1P11387 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TOP1P11387 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TOP1P11387 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.42■□□□□ 0.54
TOP1P11387 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TOP1P11387 AC036164.1-201ENST00000570544 333 ntBASIC18.42■□□□□ 0.54
TOP1P11387 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.42■□□□□ 0.54
TOP1P11387 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.42■□□□□ 0.54
TOP1P11387 MIR8072-201ENST00000614241 80 ntBASIC18.42■□□□□ 0.54
TOP1P11387 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TOP1P11387 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms