Protein–RNA interactions for Protein: P11047

LAMC1, Laminin subunit gamma-1, humanhuman

Predictions only

Length 1,609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMC1P11047 UPF3AP2-201ENST00000457924 1132 ntBASIC21.75■■□□□ 1.07
LAMC1P11047 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC21.75■■□□□ 1.07
LAMC1P11047 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
LAMC1P11047 AC138627.1-207ENST00000641560 1006 ntBASIC21.75■■□□□ 1.07
LAMC1P11047 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC21.75■■□□□ 1.07
LAMC1P11047 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LAMC1P11047 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
LAMC1P11047 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LAMC1P11047 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LAMC1P11047 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC21.74■■□□□ 1.07
LAMC1P11047 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
LAMC1P11047 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LAMC1P11047 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
LAMC1P11047 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
LAMC1P11047 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC21.74■■□□□ 1.07
LAMC1P11047 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC21.74■■□□□ 1.07
LAMC1P11047 HOMER2P2-201ENST00000451621 847 ntBASIC21.74■■□□□ 1.07
LAMC1P11047 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LAMC1P11047 RPS2P36-201ENST00000456516 831 ntBASIC21.74■■□□□ 1.07
LAMC1P11047 TMEM198B-204ENST00000484016 896 ntBASIC21.74■■□□□ 1.07
LAMC1P11047 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC21.74■■□□□ 1.07
LAMC1P11047 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC21.74■■□□□ 1.07
LAMC1P11047 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC21.74■■□□□ 1.07
LAMC1P11047 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
LAMC1P11047 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC21.74■■□□□ 1.07
LAMC1P11047 RN7SL713P-201ENST00000582127 302 ntBASIC21.74■■□□□ 1.07
LAMC1P11047 ETV2-208ENST00000621247 941 ntTSL 5 BASIC21.74■■□□□ 1.07
LAMC1P11047 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
LAMC1P11047 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
LAMC1P11047 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LAMC1P11047 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
LAMC1P11047 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LAMC1P11047 AC018735.1-201ENST00000437208 1502 ntBASIC21.74■■□□□ 1.07
LAMC1P11047 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LAMC1P11047 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LAMC1P11047 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LAMC1P11047 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LAMC1P11047 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC21.74■■□□□ 1.07
LAMC1P11047 AL023775.1-201ENST00000454907 1746 ntBASIC21.74■■□□□ 1.07
LAMC1P11047 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LAMC1P11047 TNRC18P3-201ENST00000441896 2691 ntBASIC21.74■■□□□ 1.07
LAMC1P11047 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
LAMC1P11047 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
LAMC1P11047 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC21.73■■□□□ 1.07
LAMC1P11047 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LAMC1P11047 GGCT-203ENST00000409144 836 ntTSL 2 BASIC21.73■■□□□ 1.07
LAMC1P11047 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC21.73■■□□□ 1.07
LAMC1P11047 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LAMC1P11047 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC21.73■■□□□ 1.07
LAMC1P11047 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LAMC1P11047 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC21.73■■□□□ 1.07
LAMC1P11047 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC21.73■■□□□ 1.07
LAMC1P11047 MIR4706-201ENST00000582134 82 ntBASIC21.73■■□□□ 1.07
LAMC1P11047 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LAMC1P11047 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LAMC1P11047 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC21.73■■□□□ 1.07
LAMC1P11047 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LAMC1P11047 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
LAMC1P11047 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LAMC1P11047 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LAMC1P11047 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LAMC1P11047 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC21.73■■□□□ 1.07
LAMC1P11047 AC007787.1-201ENST00000588095 1583 ntBASIC21.73■■□□□ 1.07
LAMC1P11047 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LAMC1P11047 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LAMC1P11047 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC21.73■■□□□ 1.07
LAMC1P11047 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LAMC1P11047 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LAMC1P11047 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC21.73■■□□□ 1.07
LAMC1P11047 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LAMC1P11047 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LAMC1P11047 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
LAMC1P11047 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LAMC1P11047 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC21.73■■□□□ 1.07
LAMC1P11047 TSACC-208ENST00000481479 741 ntTSL 2 BASIC21.73■■□□□ 1.07
LAMC1P11047 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC21.73■■□□□ 1.07
LAMC1P11047 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC21.73■■□□□ 1.07
LAMC1P11047 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC21.73■■□□□ 1.07
LAMC1P11047 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC21.73■■□□□ 1.07
LAMC1P11047 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC21.73■■□□□ 1.07
LAMC1P11047 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LAMC1P11047 HCG18-245ENST00000602550 559 ntTSL 4 BASIC21.73■■□□□ 1.07
LAMC1P11047 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LAMC1P11047 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LAMC1P11047 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LAMC1P11047 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LAMC1P11047 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
LAMC1P11047 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC21.72■■□□□ 1.07
LAMC1P11047 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC21.72■■□□□ 1.07
LAMC1P11047 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LAMC1P11047 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LAMC1P11047 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
LAMC1P11047 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC21.72■■□□□ 1.07
LAMC1P11047 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
LAMC1P11047 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LAMC1P11047 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
LAMC1P11047 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
LAMC1P11047 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LAMC1P11047 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LAMC1P11047 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms