Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM17P0DL12 CIC-204ENST00000572681 8218 ntTSL 5 BASIC11.8□□□□□ -0.52
SMIM17P0DL12 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM17P0DL12 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM17P0DL12 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC11.8□□□□□ -0.52
SMIM17P0DL12 AC020658.6-201ENST00000623564 1870 ntBASIC11.8□□□□□ -0.52
SMIM17P0DL12 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM17P0DL12 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM17P0DL12 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC11.8□□□□□ -0.52
SMIM17P0DL12 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM17P0DL12 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM17P0DL12 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC11.8□□□□□ -0.52
SMIM17P0DL12 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC11.8□□□□□ -0.52
SMIM17P0DL12 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM17P0DL12 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC11.8□□□□□ -0.52
SMIM17P0DL12 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM17P0DL12 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM17P0DL12 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM17P0DL12 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM17P0DL12 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM17P0DL12 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC11.79□□□□□ -0.52
SMIM17P0DL12 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM17P0DL12 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM17P0DL12 PGR-210ENST00000619228 3038 ntTSL 5 BASIC11.79□□□□□ -0.52
SMIM17P0DL12 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM17P0DL12 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM17P0DL12 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
SMIM17P0DL12 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM17P0DL12 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM17P0DL12 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM17P0DL12 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
SMIM17P0DL12 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM17P0DL12 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM17P0DL12 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM17P0DL12 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC11.79□□□□□ -0.52
SMIM17P0DL12 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
SMIM17P0DL12 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC11.79□□□□□ -0.52
SMIM17P0DL12 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
SMIM17P0DL12 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM17P0DL12 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM17P0DL12 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM17P0DL12 BET1L-202ENST00000332865 533 ntTSL 5 BASIC11.79□□□□□ -0.52
SMIM17P0DL12 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC11.79□□□□□ -0.52
SMIM17P0DL12 CD99-202ENST00000381180 530 ntTSL 2 BASIC11.79□□□□□ -0.52
SMIM17P0DL12 RAB17-203ENST00000409576 466 ntTSL 3 BASIC11.79□□□□□ -0.52
SMIM17P0DL12 ELK2BP-201ENST00000415014 1224 ntBASIC11.79□□□□□ -0.52
SMIM17P0DL12 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
SMIM17P0DL12 ATP5G2P1-201ENST00000433580 426 ntBASIC11.79□□□□□ -0.52
SMIM17P0DL12 MDH2-205ENST00000461263 648 ntTSL 2 BASIC11.79□□□□□ -0.52
SMIM17P0DL12 RPS15P9-201ENST00000494093 319 ntBASIC11.79□□□□□ -0.52
SMIM17P0DL12 TPM1-218ENST00000559281 851 ntTSL 5 BASIC11.79□□□□□ -0.52
SMIM17P0DL12 NPAP1P7-201ENST00000613027 823 ntBASIC11.79□□□□□ -0.52
SMIM17P0DL12 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC11.79□□□□□ -0.52
SMIM17P0DL12 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC11.79□□□□□ -0.52
SMIM17P0DL12 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SMIM17P0DL12 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM17P0DL12 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM17P0DL12 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM17P0DL12 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM17P0DL12 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM17P0DL12 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM17P0DL12 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM17P0DL12 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM17P0DL12 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
SMIM17P0DL12 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC11.79□□□□□ -0.52
SMIM17P0DL12 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC11.79□□□□□ -0.52
SMIM17P0DL12 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC11.79□□□□□ -0.52
SMIM17P0DL12 AC006504.4-201ENST00000592118 1568 ntBASIC11.79□□□□□ -0.52
SMIM17P0DL12 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC11.79□□□□□ -0.52
SMIM17P0DL12 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
SMIM17P0DL12 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC11.79□□□□□ -0.52
SMIM17P0DL12 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SMIM17P0DL12 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC11.78□□□□□ -0.52
SMIM17P0DL12 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SMIM17P0DL12 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SMIM17P0DL12 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SMIM17P0DL12 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SMIM17P0DL12 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SMIM17P0DL12 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SMIM17P0DL12 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC11.78□□□□□ -0.52
SMIM17P0DL12 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
SMIM17P0DL12 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
SMIM17P0DL12 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC11.78□□□□□ -0.52
SMIM17P0DL12 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
SMIM17P0DL12 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
SMIM17P0DL12 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SMIM17P0DL12 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SMIM17P0DL12 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC11.78□□□□□ -0.52
SMIM17P0DL12 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
SMIM17P0DL12 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC11.78□□□□□ -0.52
SMIM17P0DL12 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC11.78□□□□□ -0.52
SMIM17P0DL12 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SMIM17P0DL12 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SMIM17P0DL12 HIST2H3DP1-201ENST00000401004 416 ntBASIC11.78□□□□□ -0.52
SMIM17P0DL12 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SMIM17P0DL12 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SMIM17P0DL12 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC11.78□□□□□ -0.52
SMIM17P0DL12 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC11.78□□□□□ -0.52
SMIM17P0DL12 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC11.78□□□□□ -0.52
SMIM17P0DL12 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 548.8 ms