Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
IFNB1P01574 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
IFNB1P01574 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.33■□□□□ 0.2
IFNB1P01574 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
IFNB1P01574 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.33■□□□□ 0.2
IFNB1P01574 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
IFNB1P01574 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
IFNB1P01574 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
IFNB1P01574 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.33■□□□□ 0.2
IFNB1P01574 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
IFNB1P01574 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
IFNB1P01574 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.33■□□□□ 0.2
IFNB1P01574 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.33■□□□□ 0.2
IFNB1P01574 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFNB1P01574 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.32■□□□□ 0.2
IFNB1P01574 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFNB1P01574 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
IFNB1P01574 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFNB1P01574 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFNB1P01574 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFNB1P01574 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFNB1P01574 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFNB1P01574 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
IFNB1P01574 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.32■□□□□ 0.2
IFNB1P01574 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
IFNB1P01574 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
IFNB1P01574 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
IFNB1P01574 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFNB1P01574 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFNB1P01574 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
IFNB1P01574 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
IFNB1P01574 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.32■□□□□ 0.2
IFNB1P01574 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.32■□□□□ 0.2
IFNB1P01574 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.32■□□□□ 0.2
IFNB1P01574 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.32■□□□□ 0.2
IFNB1P01574 AL592309.1-201ENST00000443127 649 ntBASIC16.32■□□□□ 0.2
IFNB1P01574 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.32■□□□□ 0.2
IFNB1P01574 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
IFNB1P01574 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
IFNB1P01574 KRT18P58-201ENST00000527480 1120 ntBASIC16.32■□□□□ 0.2
IFNB1P01574 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.32■□□□□ 0.2
IFNB1P01574 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.32■□□□□ 0.2
IFNB1P01574 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.32■□□□□ 0.2
IFNB1P01574 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.32■□□□□ 0.2
IFNB1P01574 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.32■□□□□ 0.2
IFNB1P01574 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.32■□□□□ 0.2
IFNB1P01574 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
IFNB1P01574 AC026979.3-201ENST00000607315 403 ntBASIC16.32■□□□□ 0.2
IFNB1P01574 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
IFNB1P01574 AP3S2-216ENST00000617003 1561 ntBASIC16.32■□□□□ 0.2
IFNB1P01574 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.32■□□□□ 0.2
IFNB1P01574 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.32■□□□□ 0.2
IFNB1P01574 C20orf181-201ENST00000623918 480 ntBASIC16.32■□□□□ 0.2
IFNB1P01574 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
IFNB1P01574 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFNB1P01574 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFNB1P01574 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
IFNB1P01574 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
IFNB1P01574 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFNB1P01574 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFNB1P01574 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
IFNB1P01574 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFNB1P01574 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
IFNB1P01574 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
IFNB1P01574 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.31■□□□□ 0.2
IFNB1P01574 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
IFNB1P01574 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
IFNB1P01574 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFNB1P01574 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC16.31■□□□□ 0.2
IFNB1P01574 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.31■□□□□ 0.2
IFNB1P01574 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.31■□□□□ 0.2
IFNB1P01574 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
IFNB1P01574 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.31■□□□□ 0.2
IFNB1P01574 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
IFNB1P01574 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
IFNB1P01574 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFNB1P01574 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFNB1P01574 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFNB1P01574 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFNB1P01574 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.31■□□□□ 0.2
IFNB1P01574 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
IFNB1P01574 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.31■□□□□ 0.2
IFNB1P01574 ACTG1P14-201ENST00000446382 1122 ntBASIC16.31■□□□□ 0.2
IFNB1P01574 PHKG1P2-201ENST00000457537 863 ntBASIC16.31■□□□□ 0.2
IFNB1P01574 AC069335.1-201ENST00000489972 472 ntBASIC16.31■□□□□ 0.2
IFNB1P01574 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.31■□□□□ 0.2
IFNB1P01574 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.31■□□□□ 0.2
IFNB1P01574 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.31■□□□□ 0.2
IFNB1P01574 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.31■□□□□ 0.2
IFNB1P01574 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.31■□□□□ 0.2
IFNB1P01574 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.31■□□□□ 0.2
IFNB1P01574 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
IFNB1P01574 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
IFNB1P01574 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.31■□□□□ 0.2
IFNB1P01574 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
IFNB1P01574 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.31■□□□□ 0.2
IFNB1P01574 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFNB1P01574 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFNB1P01574 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.31■□□□□ 0.2
IFNB1P01574 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms