Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CTNND1O60716 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTNND1O60716 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTNND1O60716 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CTNND1O60716 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
CTNND1O60716 AHCYP2-201ENST00000430630 1300 ntBASIC18.23■□□□□ 0.51
CTNND1O60716 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CTNND1O60716 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.23■□□□□ 0.51
CTNND1O60716 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTNND1O60716 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTNND1O60716 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CTNND1O60716 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTNND1O60716 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTNND1O60716 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTNND1O60716 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTNND1O60716 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTNND1O60716 MIR326-201ENST00000362220 95 ntBASIC18.23■□□□□ 0.51
CTNND1O60716 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CTNND1O60716 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTNND1O60716 AC006033.1-201ENST00000440505 426 ntBASIC18.23■□□□□ 0.51
CTNND1O60716 GOLGA2P4-201ENST00000441462 777 ntBASIC18.23■□□□□ 0.51
CTNND1O60716 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC18.23■□□□□ 0.51
CTNND1O60716 PFN2-215ENST00000497148 743 ntTSL 4 BASIC18.23■□□□□ 0.51
CTNND1O60716 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC18.23■□□□□ 0.51
CTNND1O60716 C2orf69P2-201ENST00000562032 1123 ntBASIC18.23■□□□□ 0.51
CTNND1O60716 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC18.23■□□□□ 0.51
CTNND1O60716 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CTNND1O60716 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC18.23■□□□□ 0.51
CTNND1O60716 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC18.23■□□□□ 0.51
CTNND1O60716 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC18.23■□□□□ 0.51
CTNND1O60716 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC18.23■□□□□ 0.51
CTNND1O60716 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTNND1O60716 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CTNND1O60716 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CTNND1O60716 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
CTNND1O60716 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTNND1O60716 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.23■□□□□ 0.51
CTNND1O60716 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTNND1O60716 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTNND1O60716 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTNND1O60716 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CTNND1O60716 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.22■□□□□ 0.51
CTNND1O60716 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTNND1O60716 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CTNND1O60716 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CTNND1O60716 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTNND1O60716 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.22■□□□□ 0.51
CTNND1O60716 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTNND1O60716 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CTNND1O60716 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTNND1O60716 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTNND1O60716 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CTNND1O60716 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CTNND1O60716 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTNND1O60716 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.22■□□□□ 0.51
CTNND1O60716 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTNND1O60716 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC18.22■□□□□ 0.51
CTNND1O60716 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTNND1O60716 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTNND1O60716 CD8B2-202ENST00000417670 633 ntBASIC18.22■□□□□ 0.51
CTNND1O60716 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CTNND1O60716 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC18.22■□□□□ 0.51
CTNND1O60716 KRT8P13-201ENST00000463294 1010 ntBASIC18.22■□□□□ 0.51
CTNND1O60716 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CTNND1O60716 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CTNND1O60716 RNA5SP486-201ENST00000515961 83 ntBASIC18.22■□□□□ 0.51
CTNND1O60716 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CTNND1O60716 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC18.22■□□□□ 0.51
CTNND1O60716 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
CTNND1O60716 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC18.22■□□□□ 0.51
CTNND1O60716 IGHV3OR16-16-201ENST00000563644 343 ntBASIC18.22■□□□□ 0.51
CTNND1O60716 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC18.22■□□□□ 0.51
CTNND1O60716 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC18.22■□□□□ 0.51
CTNND1O60716 GPR39-203ENST00000622084 900 ntTSL 5 BASIC18.22■□□□□ 0.51
CTNND1O60716 AL139099.5-201ENST00000635274 300 ntBASIC18.22■□□□□ 0.51
CTNND1O60716 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTNND1O60716 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CTNND1O60716 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTNND1O60716 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTNND1O60716 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC18.22■□□□□ 0.51
CTNND1O60716 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTNND1O60716 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTNND1O60716 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.22■□□□□ 0.51
CTNND1O60716 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTNND1O60716 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
CTNND1O60716 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CTNND1O60716 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
CTNND1O60716 AC011270.2-201ENST00000624293 2550 ntBASIC18.22■□□□□ 0.51
CTNND1O60716 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.22■□□□□ 0.51
CTNND1O60716 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTNND1O60716 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTNND1O60716 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTNND1O60716 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTNND1O60716 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CTNND1O60716 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC18.21■□□□□ 0.51
CTNND1O60716 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CTNND1O60716 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTNND1O60716 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.21■□□□□ 0.51
CTNND1O60716 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CTNND1O60716 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms