Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.99□□□□□ -0.17
SGCEO43556 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SGCEO43556 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SGCEO43556 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SGCEO43556 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
SGCEO43556 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
SGCEO43556 KRT8P37-201ENST00000451609 1420 ntBASIC13.98□□□□□ -0.17
SGCEO43556 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SGCEO43556 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SGCEO43556 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.98□□□□□ -0.17
SGCEO43556 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.98□□□□□ -0.17
SGCEO43556 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SGCEO43556 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SGCEO43556 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SGCEO43556 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SGCEO43556 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.98□□□□□ -0.17
SGCEO43556 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SGCEO43556 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SGCEO43556 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SGCEO43556 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SGCEO43556 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.98□□□□□ -0.17
SGCEO43556 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SGCEO43556 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.98□□□□□ -0.17
SGCEO43556 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SGCEO43556 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SGCEO43556 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
SGCEO43556 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SGCEO43556 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SGCEO43556 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SGCEO43556 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SGCEO43556 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SGCEO43556 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.98□□□□□ -0.17
SGCEO43556 SPDYE7P-202ENST00000420373 878 ntBASIC13.98□□□□□ -0.17
SGCEO43556 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SGCEO43556 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.98□□□□□ -0.17
SGCEO43556 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.98□□□□□ -0.17
SGCEO43556 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.98□□□□□ -0.17
SGCEO43556 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
SGCEO43556 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.98□□□□□ -0.17
SGCEO43556 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SGCEO43556 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SGCEO43556 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.98□□□□□ -0.17
SGCEO43556 AC105021.1-202ENST00000570572 669 ntBASIC13.98□□□□□ -0.17
SGCEO43556 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SGCEO43556 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SGCEO43556 MIR6080-201ENST00000617359 66 ntBASIC13.98□□□□□ -0.17
SGCEO43556 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.98□□□□□ -0.17
SGCEO43556 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SGCEO43556 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SGCEO43556 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SGCEO43556 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SGCEO43556 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SGCEO43556 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SGCEO43556 SNX18-202ENST00000343017 3140 ntBASIC13.98□□□□□ -0.17
SGCEO43556 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SGCEO43556 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SGCEO43556 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SGCEO43556 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SGCEO43556 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SGCEO43556 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SGCEO43556 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SGCEO43556 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SGCEO43556 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SGCEO43556 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
SGCEO43556 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SGCEO43556 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.98□□□□□ -0.17
SGCEO43556 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SGCEO43556 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SGCEO43556 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SGCEO43556 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SGCEO43556 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.97□□□□□ -0.17
SGCEO43556 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SGCEO43556 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.97□□□□□ -0.17
SGCEO43556 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SGCEO43556 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SGCEO43556 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.97□□□□□ -0.17
SGCEO43556 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.97□□□□□ -0.17
SGCEO43556 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SGCEO43556 TNRC18P2-201ENST00000417666 2714 ntBASIC13.97□□□□□ -0.17
SGCEO43556 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SGCEO43556 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.97□□□□□ -0.17
SGCEO43556 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
SGCEO43556 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.97□□□□□ -0.17
SGCEO43556 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.97□□□□□ -0.17
SGCEO43556 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SGCEO43556 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SGCEO43556 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SGCEO43556 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SGCEO43556 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SGCEO43556 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.97□□□□□ -0.17
SGCEO43556 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
SGCEO43556 DNAJB3-202ENST00000449667 1266 ntBASIC13.97□□□□□ -0.17
SGCEO43556 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.97□□□□□ -0.17
SGCEO43556 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.97□□□□□ -0.17
SGCEO43556 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.97□□□□□ -0.17
SGCEO43556 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
SGCEO43556 AC007967.4-201ENST00000614700 386 ntBASIC13.97□□□□□ -0.17
SGCEO43556 AP001059.3-201ENST00000619053 235 ntBASIC13.97□□□□□ -0.17
SGCEO43556 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.97□□□□□ -0.17
SGCEO43556 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms