Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 LINC00628-201ENST00000628516 1289 ntBASIC11.32□□□□□ -0.6
PAX4O43316 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC11.32□□□□□ -0.6
PAX4O43316 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC11.32□□□□□ -0.6
PAX4O43316 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC11.32□□□□□ -0.6
PAX4O43316 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
PAX4O43316 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC11.32□□□□□ -0.6
PAX4O43316 DBET-201ENST00000630918 3363 ntBASIC11.32□□□□□ -0.6
PAX4O43316 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC11.32□□□□□ -0.6
PAX4O43316 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC11.32□□□□□ -0.6
PAX4O43316 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PAX4O43316 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC11.32□□□□□ -0.6
PAX4O43316 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PAX4O43316 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
PAX4O43316 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC11.32□□□□□ -0.6
PAX4O43316 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PAX4O43316 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC11.32□□□□□ -0.6
PAX4O43316 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PAX4O43316 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC11.32□□□□□ -0.6
PAX4O43316 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
PAX4O43316 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC11.32□□□□□ -0.6
PAX4O43316 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PAX4O43316 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC11.32□□□□□ -0.6
PAX4O43316 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC11.32□□□□□ -0.6
PAX4O43316 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
PAX4O43316 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
PAX4O43316 AL603832.2-201ENST00000566195 2125 ntBASIC11.32□□□□□ -0.6
PAX4O43316 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
PAX4O43316 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
PAX4O43316 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PAX4O43316 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC11.32□□□□□ -0.6
PAX4O43316 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PAX4O43316 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
PAX4O43316 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PAX4O43316 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
PAX4O43316 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
PAX4O43316 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC11.31□□□□□ -0.6
PAX4O43316 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PAX4O43316 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC11.31□□□□□ -0.6
PAX4O43316 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC11.31□□□□□ -0.6
PAX4O43316 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PAX4O43316 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
PAX4O43316 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PAX4O43316 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PAX4O43316 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PAX4O43316 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
PAX4O43316 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
PAX4O43316 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
PAX4O43316 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC11.31□□□□□ -0.6
PAX4O43316 MTND6P24-201ENST00000440466 518 ntBASIC11.31□□□□□ -0.6
PAX4O43316 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC11.31□□□□□ -0.6
PAX4O43316 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC11.31□□□□□ -0.6
PAX4O43316 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC11.31□□□□□ -0.6
PAX4O43316 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PAX4O43316 AP001160.2-201ENST00000596071 487 ntBASIC11.31□□□□□ -0.6
PAX4O43316 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC11.31□□□□□ -0.6
PAX4O43316 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PAX4O43316 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC11.31□□□□□ -0.6
PAX4O43316 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
PAX4O43316 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
PAX4O43316 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC11.31□□□□□ -0.6
PAX4O43316 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC11.31□□□□□ -0.6
PAX4O43316 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PAX4O43316 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC11.31□□□□□ -0.6
PAX4O43316 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC11.31□□□□□ -0.6
PAX4O43316 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC11.31□□□□□ -0.6
PAX4O43316 AC069224.1-201ENST00000566372 1715 ntBASIC11.31□□□□□ -0.6
PAX4O43316 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
PAX4O43316 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PAX4O43316 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
PAX4O43316 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
PAX4O43316 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
PAX4O43316 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PAX4O43316 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PAX4O43316 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
PAX4O43316 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PAX4O43316 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PAX4O43316 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PAX4O43316 PRAL-201ENST00000624952 3286 ntBASIC11.31□□□□□ -0.6
PAX4O43316 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC11.31□□□□□ -0.6
PAX4O43316 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PAX4O43316 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PAX4O43316 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PAX4O43316 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
PAX4O43316 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PAX4O43316 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
PAX4O43316 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PAX4O43316 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
PAX4O43316 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PAX4O43316 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PAX4O43316 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
PAX4O43316 AL035456.1-201ENST00000456064 1369 ntBASIC11.3□□□□□ -0.6
PAX4O43316 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PAX4O43316 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PAX4O43316 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
PAX4O43316 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PAX4O43316 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC11.3□□□□□ -0.6
PAX4O43316 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
PAX4O43316 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PAX4O43316 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC11.3□□□□□ -0.6
PAX4O43316 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms