Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.42■□□□□ 0.06
CDC7O00311 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDC7O00311 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
CDC7O00311 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
CDC7O00311 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDC7O00311 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CDC7O00311 MIR1233-2-201ENST00000408138 82 ntBASIC15.42■□□□□ 0.06
CDC7O00311 MIR1233-1-201ENST00000408722 82 ntBASIC15.42■□□□□ 0.06
CDC7O00311 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
CDC7O00311 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDC7O00311 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.42■□□□□ 0.06
CDC7O00311 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDC7O00311 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
CDC7O00311 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDC7O00311 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.42■□□□□ 0.06
CDC7O00311 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDC7O00311 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.42■□□□□ 0.06
CDC7O00311 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.42■□□□□ 0.06
CDC7O00311 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.42■□□□□ 0.06
CDC7O00311 AL691403.2-201ENST00000618460 490 ntBASIC15.42■□□□□ 0.06
CDC7O00311 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.42■□□□□ 0.06
CDC7O00311 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDC7O00311 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDC7O00311 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.42■□□□□ 0.06
CDC7O00311 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDC7O00311 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDC7O00311 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDC7O00311 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDC7O00311 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDC7O00311 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.42■□□□□ 0.06
CDC7O00311 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.42■□□□□ 0.06
CDC7O00311 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
CDC7O00311 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CDC7O00311 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDC7O00311 LINC02228-204ENST00000642115 2962 ntBASIC15.42■□□□□ 0.06
CDC7O00311 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDC7O00311 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDC7O00311 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDC7O00311 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDC7O00311 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDC7O00311 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDC7O00311 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDC7O00311 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CDC7O00311 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.41■□□□□ 0.06
CDC7O00311 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDC7O00311 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
CDC7O00311 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CDC7O00311 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.41■□□□□ 0.06
CDC7O00311 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDC7O00311 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDC7O00311 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDC7O00311 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CDC7O00311 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDC7O00311 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.41■□□□□ 0.06
CDC7O00311 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDC7O00311 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDC7O00311 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDC7O00311 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CDC7O00311 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDC7O00311 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.41■□□□□ 0.06
CDC7O00311 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.41■□□□□ 0.06
CDC7O00311 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.41■□□□□ 0.06
CDC7O00311 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDC7O00311 SPDYE12P-201ENST00000618416 771 ntBASIC15.41■□□□□ 0.06
CDC7O00311 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.41■□□□□ 0.06
CDC7O00311 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDC7O00311 AC023024.2-201ENST00000623561 1993 ntBASIC15.41■□□□□ 0.06
CDC7O00311 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDC7O00311 AC126365.1-201ENST00000578585 1514 ntBASIC15.41■□□□□ 0.06
CDC7O00311 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.41■□□□□ 0.06
CDC7O00311 AC148477.4-201ENST00000613430 1793 ntBASIC15.41■□□□□ 0.06
CDC7O00311 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDC7O00311 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDC7O00311 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDC7O00311 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CDC7O00311 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.41■□□□□ 0.06
CDC7O00311 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDC7O00311 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDC7O00311 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDC7O00311 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
CDC7O00311 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDC7O00311 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC7O00311 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC7O00311 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC7O00311 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC7O00311 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC7O00311 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC7O00311 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDC7O00311 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CDC7O00311 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC7O00311 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.4■□□□□ 0.06
CDC7O00311 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC7O00311 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC7O00311 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC7O00311 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.4■□□□□ 0.06
CDC7O00311 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.4■□□□□ 0.06
CDC7O00311 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC7O00311 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.4■□□□□ 0.06
CDC7O00311 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDC7O00311 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 968.1 ms