Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.36■□□□□ 0.21
CCDC188H7C350 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC188H7C350 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC188H7C350 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CCDC188H7C350 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC188H7C350 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC188H7C350 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC188H7C350 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC188H7C350 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC188H7C350 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.36■□□□□ 0.21
CCDC188H7C350 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.36■□□□□ 0.21
CCDC188H7C350 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC188H7C350 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC188H7C350 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC188H7C350 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC188H7C350 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
CCDC188H7C350 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.35■□□□□ 0.21
CCDC188H7C350 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
CCDC188H7C350 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC188H7C350 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC188H7C350 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CCDC188H7C350 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CCDC188H7C350 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CCDC188H7C350 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC188H7C350 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC188H7C350 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.35■□□□□ 0.21
CCDC188H7C350 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
CCDC188H7C350 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC188H7C350 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC188H7C350 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC188H7C350 AC136604.1-201ENST00000418535 575 ntBASIC16.35■□□□□ 0.21
CCDC188H7C350 AC142381.1-201ENST00000426099 345 ntBASIC16.35■□□□□ 0.21
CCDC188H7C350 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC188H7C350 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.35■□□□□ 0.21
CCDC188H7C350 AC093909.1-201ENST00000504731 1122 ntBASIC16.35■□□□□ 0.21
CCDC188H7C350 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC188H7C350 AC112191.1-201ENST00000523689 701 ntBASIC16.35■□□□□ 0.21
CCDC188H7C350 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC188H7C350 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC188H7C350 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC188H7C350 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.35■□□□□ 0.21
CCDC188H7C350 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.35■□□□□ 0.21
CCDC188H7C350 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC188H7C350 AC008267.7-201ENST00000624570 1194 ntBASIC16.35■□□□□ 0.21
CCDC188H7C350 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CCDC188H7C350 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
CCDC188H7C350 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC188H7C350 AKAP8P1-201ENST00000434743 1349 ntBASIC16.35■□□□□ 0.21
CCDC188H7C350 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC188H7C350 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC188H7C350 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC188H7C350 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CCDC188H7C350 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC188H7C350 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC188H7C350 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC188H7C350 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CCDC188H7C350 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC188H7C350 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.35■□□□□ 0.21
CCDC188H7C350 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.35■□□□□ 0.21
CCDC188H7C350 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC188H7C350 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.35■□□□□ 0.21
CCDC188H7C350 ACE3P-201ENST00000423435 1973 ntBASIC16.35■□□□□ 0.21
CCDC188H7C350 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC188H7C350 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.35■□□□□ 0.21
CCDC188H7C350 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC188H7C350 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC188H7C350 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC188H7C350 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC188H7C350 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC188H7C350 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CCDC188H7C350 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC188H7C350 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC188H7C350 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CCDC188H7C350 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CCDC188H7C350 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC188H7C350 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC188H7C350 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC188H7C350 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC188H7C350 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC188H7C350 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
CCDC188H7C350 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC188H7C350 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CCDC188H7C350 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.34■□□□□ 0.21
CCDC188H7C350 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC188H7C350 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.34■□□□□ 0.21
CCDC188H7C350 AC079781.3-201ENST00000449110 356 ntBASIC16.34■□□□□ 0.21
CCDC188H7C350 AC074386.1-202ENST00000463561 864 ntBASIC16.34■□□□□ 0.21
CCDC188H7C350 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.34■□□□□ 0.21
CCDC188H7C350 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.34■□□□□ 0.21
CCDC188H7C350 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CCDC188H7C350 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.34■□□□□ 0.21
CCDC188H7C350 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CCDC188H7C350 AP002472.1-201ENST00000577490 586 ntBASIC16.34■□□□□ 0.21
CCDC188H7C350 AC011467.4-201ENST00000594891 528 ntBASIC16.34■□□□□ 0.21
CCDC188H7C350 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CCDC188H7C350 AC099522.2-201ENST00000607001 744 ntBASIC16.34■□□□□ 0.21
CCDC188H7C350 Z83851.2-201ENST00000609564 659 ntBASIC16.34■□□□□ 0.21
CCDC188H7C350 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC188H7C350 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC188H7C350 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms