Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 AC093726.1-201ENST00000608064 963 ntBASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 IGHV3-72-202ENST00000621503 303 ntBASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 LINC02199-201ENST00000506655 2702 ntBASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NPIPA2E9PIF3 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
NPIPA2E9PIF3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPA2E9PIF3 AC134407.2-201ENST00000625089 1978 ntBASIC14.34□□□□□ -0.11
NPIPA2E9PIF3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPA2E9PIF3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPA2E9PIF3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
NPIPA2E9PIF3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPA2E9PIF3 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.34□□□□□ -0.11
NPIPA2E9PIF3 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPA2E9PIF3 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NPIPA2E9PIF3 AC008741.2-201ENST00000612792 3115 ntBASIC14.34□□□□□ -0.11
NPIPA2E9PIF3 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPA2E9PIF3 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
NPIPA2E9PIF3 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPA2E9PIF3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.34□□□□□ -0.11
NPIPA2E9PIF3 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.34□□□□□ -0.11
NPIPA2E9PIF3 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NPIPA2E9PIF3 CTBP2P3-201ENST00000585629 1255 ntBASIC14.34□□□□□ -0.11
NPIPA2E9PIF3 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.34□□□□□ -0.11
NPIPA2E9PIF3 AC099568.2-201ENST00000609194 695 ntBASIC14.34□□□□□ -0.11
NPIPA2E9PIF3 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPA2E9PIF3 AC010491.1-201ENST00000563101 2797 ntBASIC14.34□□□□□ -0.11
NPIPA2E9PIF3 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPA2E9PIF3 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.34□□□□□ -0.11
NPIPA2E9PIF3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NPIPA2E9PIF3 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NPIPA2E9PIF3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPA2E9PIF3 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPA2E9PIF3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPA2E9PIF3 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPA2E9PIF3 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPA2E9PIF3 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPA2E9PIF3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NPIPA2E9PIF3 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NPIPA2E9PIF3 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
NPIPA2E9PIF3 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
NPIPA2E9PIF3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.33□□□□□ -0.11
NPIPA2E9PIF3 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NPIPA2E9PIF3 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
NPIPA2E9PIF3 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NPIPA2E9PIF3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.33□□□□□ -0.11
NPIPA2E9PIF3 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 AL161772.1-201ENST00000610494 4412 ntBASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 AC098850.1-201ENST00000419919 790 ntBASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 GPR53P-205ENST00000457298 1084 ntBASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 ELK1P1-201ENST00000485699 580 ntBASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 AC104596.2-201ENST00000512793 793 ntBASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 AL359881.2-201ENST00000602973 570 ntBASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 LINC01115-203ENST00000606068 577 ntBASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPA2E9PIF3 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms