Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16■□□□□ 0.15
CAPN8A6NHC0 AP005018.1-201ENST00000525475 301 ntBASIC16■□□□□ 0.15
CAPN8A6NHC0 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16■□□□□ 0.15
CAPN8A6NHC0 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16■□□□□ 0.15
CAPN8A6NHC0 AL450472.2-201ENST00000603663 1156 ntBASIC16■□□□□ 0.15
CAPN8A6NHC0 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16■□□□□ 0.15
CAPN8A6NHC0 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CAPN8A6NHC0 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CAPN8A6NHC0 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CAPN8A6NHC0 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CAPN8A6NHC0 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16■□□□□ 0.15
CAPN8A6NHC0 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CAPN8A6NHC0 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CAPN8A6NHC0 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16■□□□□ 0.15
CAPN8A6NHC0 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16■□□□□ 0.15
CAPN8A6NHC0 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16■□□□□ 0.15
CAPN8A6NHC0 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16■□□□□ 0.15
CAPN8A6NHC0 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CAPN8A6NHC0 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16■□□□□ 0.15
CAPN8A6NHC0 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16■□□□□ 0.15
CAPN8A6NHC0 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CAPN8A6NHC0 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.99■□□□□ 0.15
CAPN8A6NHC0 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 AC006058.4-201ENST00000624016 1670 ntBASIC15.99■□□□□ 0.15
CAPN8A6NHC0 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 GPR53P-205ENST00000457298 1084 ntBASIC15.99■□□□□ 0.15
CAPN8A6NHC0 AC004890.2-204ENST00000481968 304 ntBASIC15.99■□□□□ 0.15
CAPN8A6NHC0 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 ZNF890P-202ENST00000530367 1156 ntBASIC15.99■□□□□ 0.15
CAPN8A6NHC0 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN8A6NHC0 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 PIN1P1-201ENST00000412108 996 ntBASIC15.98■□□□□ 0.15
CAPN8A6NHC0 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 AC009477.1-201ENST00000452936 217 ntBASIC15.98■□□□□ 0.15
CAPN8A6NHC0 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 PHKG1P2-201ENST00000457537 863 ntBASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms