Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 AC132938.4-201ENST00000623835 848 ntBASIC13.68□□□□□ -0.22
MBD3L3A6NE82 PRSS30P-206ENST00000641773 873 ntBASIC13.68□□□□□ -0.22
MBD3L3A6NE82 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 AL138709.1-201ENST00000614840 1693 ntBASIC13.68□□□□□ -0.22
MBD3L3A6NE82 AC022188.1-201ENST00000620960 1664 ntBASIC13.68□□□□□ -0.22
MBD3L3A6NE82 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 AL513523.2-202ENST00000427283 2040 ntBASIC13.68□□□□□ -0.22
MBD3L3A6NE82 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 RPL5P21-201ENST00000404620 815 ntBASIC13.67□□□□□ -0.22
MBD3L3A6NE82 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 AC026954.1-201ENST00000429771 1293 ntBASIC13.67□□□□□ -0.22
MBD3L3A6NE82 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MBD3L3A6NE82 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 AC010491.1-201ENST00000563101 2797 ntBASIC13.66□□□□□ -0.22
MBD3L3A6NE82 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 AC006001.1-201ENST00000325130 474 ntBASIC13.66□□□□□ -0.22
MBD3L3A6NE82 FAM86MP-201ENST00000340703 885 ntBASIC13.66□□□□□ -0.22
MBD3L3A6NE82 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 ACTBP11-201ENST00000436287 1126 ntBASIC13.66□□□□□ -0.22
MBD3L3A6NE82 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MBD3L3A6NE82 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms