Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 LINC01115-203ENST00000606068 577 ntBASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 AC004461.2-201ENST00000629517 803 ntBASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.14□□□□□ -0.15
HDGFL3Q9Y3E1 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDGFL3Q9Y3E1 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.13□□□□□ -0.15
HDGFL3Q9Y3E1 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
HDGFL3Q9Y3E1 AC138969.3-201ENST00000546612 1459 ntBASIC14.13□□□□□ -0.15
HDGFL3Q9Y3E1 AC138932.2-201ENST00000548268 1459 ntBASIC14.13□□□□□ -0.15
HDGFL3Q9Y3E1 AC126755.4-201ENST00000549796 1459 ntBASIC14.13□□□□□ -0.15
HDGFL3Q9Y3E1 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HDGFL3Q9Y3E1 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HDGFL3Q9Y3E1 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDGFL3Q9Y3E1 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.13□□□□□ -0.15
HDGFL3Q9Y3E1 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDGFL3Q9Y3E1 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.13□□□□□ -0.15
HDGFL3Q9Y3E1 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.13□□□□□ -0.15
HDGFL3Q9Y3E1 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.13□□□□□ -0.15
HDGFL3Q9Y3E1 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.13□□□□□ -0.15
HDGFL3Q9Y3E1 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.13□□□□□ -0.15
HDGFL3Q9Y3E1 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.13□□□□□ -0.15
HDGFL3Q9Y3E1 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDGFL3Q9Y3E1 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.13□□□□□ -0.15
HDGFL3Q9Y3E1 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDGFL3Q9Y3E1 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.13□□□□□ -0.15
HDGFL3Q9Y3E1 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
HDGFL3Q9Y3E1 AC008738.7-201ENST00000609744 511 ntBASIC14.13□□□□□ -0.15
HDGFL3Q9Y3E1 AJ011932.1-201ENST00000621707 465 ntBASIC14.13□□□□□ -0.15
HDGFL3Q9Y3E1 AC067930.6-201ENST00000623257 4947 ntBASIC14.13□□□□□ -0.15
HDGFL3Q9Y3E1 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
HDGFL3Q9Y3E1 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.13□□□□□ -0.15
HDGFL3Q9Y3E1 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDGFL3Q9Y3E1 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDGFL3Q9Y3E1 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
HDGFL3Q9Y3E1 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDGFL3Q9Y3E1 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDGFL3Q9Y3E1 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.13□□□□□ -0.15
HDGFL3Q9Y3E1 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
HDGFL3Q9Y3E1 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.13□□□□□ -0.15
HDGFL3Q9Y3E1 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
HDGFL3Q9Y3E1 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDGFL3Q9Y3E1 TMBIM7P-203ENST00000641617 1718 ntBASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 AC087481.3-201ENST00000602886 1894 ntBASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 AL133267.1-201ENST00000398220 340 ntBASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 MRPS18AP1-201ENST00000414458 589 ntBASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 FAM8A3P-201ENST00000427218 844 ntBASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 AC011467.4-201ENST00000594891 528 ntBASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 AF228730.6-201ENST00000641497 218 ntBASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms