Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NPC1L1Q9UHC9 CICP6-201ENST00000457191 2729 ntBASIC20.86■□□□□ 0.93
NPC1L1Q9UHC9 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC20.86■□□□□ 0.93
NPC1L1Q9UHC9 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPC1L1Q9UHC9 AC138035.3-201ENST00000622706 2791 ntBASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 AC005229.1-201ENST00000392885 409 ntBASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 AP001582.1-201ENST00000525856 295 ntBASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 KSR1-207ENST00000578981 748 ntTSL 4 BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 SLC9A7P1-202ENST00000556476 2239 ntBASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 BAATP1-201ENST00000412284 1225 ntBASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 KLF2P2-201ENST00000416807 1039 ntBASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 AP001889.1-201ENST00000525414 633 ntBASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC20.85■□□□□ 0.93
NPC1L1Q9UHC9 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 WASH3P-207ENST00000560956 1394 ntBASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 AP000845.1-201ENST00000581677 2131 ntBASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 U91328.1-201ENST00000437528 223 ntBASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 AC114812.1-204ENST00000449669 728 ntBASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NPC1L1Q9UHC9 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NPC1L1Q9UHC9 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC20.83■□□□□ 0.93
NPC1L1Q9UHC9 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
NPC1L1Q9UHC9 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NPC1L1Q9UHC9 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms