Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 DKKL1P1-201ENST00000400550 698 ntBASIC24.02■■□□□ 1.44
RIMBP3Q9UFD9 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC24.02■■□□□ 1.44
RIMBP3Q9UFD9 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC24.02■■□□□ 1.44
RIMBP3Q9UFD9 AL451000.1-201ENST00000451300 1186 ntBASIC24.02■■□□□ 1.44
RIMBP3Q9UFD9 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC24.02■■□□□ 1.44
RIMBP3Q9UFD9 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC24.02■■□□□ 1.44
RIMBP3Q9UFD9 AC140113.1-201ENST00000603467 169 ntBASIC24.02■■□□□ 1.44
RIMBP3Q9UFD9 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC24.02■■□□□ 1.44
RIMBP3Q9UFD9 AL450487.2-201ENST00000615934 407 ntBASIC24.02■■□□□ 1.44
RIMBP3Q9UFD9 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
RIMBP3Q9UFD9 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RIMBP3Q9UFD9 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
RIMBP3Q9UFD9 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC24.01■■□□□ 1.43
RIMBP3Q9UFD9 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RIMBP3Q9UFD9 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC24.01■■□□□ 1.43
RIMBP3Q9UFD9 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RIMBP3Q9UFD9 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC24.01■■□□□ 1.43
RIMBP3Q9UFD9 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
RIMBP3Q9UFD9 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
RIMBP3Q9UFD9 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RIMBP3Q9UFD9 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
RIMBP3Q9UFD9 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC24.01■■□□□ 1.43
RIMBP3Q9UFD9 HLA-K-203ENST00000430151 1046 ntBASIC24.01■■□□□ 1.43
RIMBP3Q9UFD9 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC24.01■■□□□ 1.43
RIMBP3Q9UFD9 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
RIMBP3Q9UFD9 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC24.01■■□□□ 1.43
RIMBP3Q9UFD9 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC24.01■■□□□ 1.43
RIMBP3Q9UFD9 IGHEP2-201ENST00000519308 1256 ntBASIC24.01■■□□□ 1.43
RIMBP3Q9UFD9 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC24.01■■□□□ 1.43
RIMBP3Q9UFD9 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RIMBP3Q9UFD9 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC24.01■■□□□ 1.43
RIMBP3Q9UFD9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
RIMBP3Q9UFD9 MIR6720-201ENST00000611664 98 ntBASIC24.01■■□□□ 1.43
RIMBP3Q9UFD9 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RIMBP3Q9UFD9 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC24.01■■□□□ 1.43
RIMBP3Q9UFD9 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RIMBP3Q9UFD9 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RIMBP3Q9UFD9 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RIMBP3Q9UFD9 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC24.01■■□□□ 1.43
RIMBP3Q9UFD9 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC24■■□□□ 1.43
RIMBP3Q9UFD9 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RIMBP3Q9UFD9 AC021305.1-201ENST00000520656 1514 ntBASIC24■■□□□ 1.43
RIMBP3Q9UFD9 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC24■■□□□ 1.43
RIMBP3Q9UFD9 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RIMBP3Q9UFD9 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC24■■□□□ 1.43
RIMBP3Q9UFD9 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC24■■□□□ 1.43
RIMBP3Q9UFD9 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC24■■□□□ 1.43
RIMBP3Q9UFD9 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC24■■□□□ 1.43
RIMBP3Q9UFD9 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC24■■□□□ 1.43
RIMBP3Q9UFD9 GPX3-202ENST00000517973 612 ntTSL 3 BASIC24■■□□□ 1.43
RIMBP3Q9UFD9 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC24■■□□□ 1.43
RIMBP3Q9UFD9 AC254633.1-201ENST00000606790 345 ntBASIC24■■□□□ 1.43
RIMBP3Q9UFD9 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RIMBP3Q9UFD9 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
RIMBP3Q9UFD9 MARK2P16-201ENST00000605714 1723 ntBASIC24■■□□□ 1.43
RIMBP3Q9UFD9 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
RIMBP3Q9UFD9 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC24■■□□□ 1.43
RIMBP3Q9UFD9 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
RIMBP3Q9UFD9 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC24■■□□□ 1.43
RIMBP3Q9UFD9 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RIMBP3Q9UFD9 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RIMBP3Q9UFD9 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC24■■□□□ 1.43
RIMBP3Q9UFD9 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RIMBP3Q9UFD9 HLF-202ENST00000430986 1385 ntTSL 2 BASIC23.99■■□□□ 1.43
RIMBP3Q9UFD9 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
RIMBP3Q9UFD9 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC23.99■■□□□ 1.43
RIMBP3Q9UFD9 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RIMBP3Q9UFD9 PFN2-205ENST00000461868 613 ntTSL 2 BASIC23.99■■□□□ 1.43
RIMBP3Q9UFD9 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC23.99■■□□□ 1.43
RIMBP3Q9UFD9 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC23.99■■□□□ 1.43
RIMBP3Q9UFD9 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
RIMBP3Q9UFD9 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC23.99■■□□□ 1.43
RIMBP3Q9UFD9 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RIMBP3Q9UFD9 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC23.99■■□□□ 1.43
RIMBP3Q9UFD9 AC068867.1-201ENST00000559855 150 ntBASIC23.99■■□□□ 1.43
RIMBP3Q9UFD9 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC23.99■■□□□ 1.43
RIMBP3Q9UFD9 AL118522.1-201ENST00000611368 560 ntBASIC23.99■■□□□ 1.43
RIMBP3Q9UFD9 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
RIMBP3Q9UFD9 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RIMBP3Q9UFD9 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RIMBP3Q9UFD9 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RIMBP3Q9UFD9 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
RIMBP3Q9UFD9 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC23.99■■□□□ 1.43
RIMBP3Q9UFD9 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC23.99■■□□□ 1.43
RIMBP3Q9UFD9 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RIMBP3Q9UFD9 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RIMBP3Q9UFD9 FAU-201ENST00000279259 461 ntTSL 2 BASIC23.99■■□□□ 1.43
RIMBP3Q9UFD9 RN7SL582P-201ENST00000491078 279 ntBASIC23.99■■□□□ 1.43
RIMBP3Q9UFD9 AC090820.1-201ENST00000519722 591 ntBASIC23.99■■□□□ 1.43
RIMBP3Q9UFD9 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC23.99■■□□□ 1.43
RIMBP3Q9UFD9 AC009884.2-201ENST00000603110 324 ntBASIC23.99■■□□□ 1.43
RIMBP3Q9UFD9 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC23.99■■□□□ 1.43
RIMBP3Q9UFD9 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC23.99■■□□□ 1.43
RIMBP3Q9UFD9 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC23.98■■□□□ 1.43
RIMBP3Q9UFD9 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC23.98■■□□□ 1.43
RIMBP3Q9UFD9 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC23.98■■□□□ 1.43
RIMBP3Q9UFD9 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RIMBP3Q9UFD9 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC23.98■■□□□ 1.43
RIMBP3Q9UFD9 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RIMBP3Q9UFD9 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC23.98■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms