Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
HOXC10Q9NYD6 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.83■□□□□ 0.44
HOXC10Q9NYD6 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HOXC10Q9NYD6 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HOXC10Q9NYD6 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
HOXC10Q9NYD6 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HOXC10Q9NYD6 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HOXC10Q9NYD6 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
HOXC10Q9NYD6 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HOXC10Q9NYD6 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
HOXC10Q9NYD6 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
HOXC10Q9NYD6 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HOXC10Q9NYD6 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.83■□□□□ 0.44
HOXC10Q9NYD6 LINC02447-202ENST00000501888 2146 ntBASIC17.83■□□□□ 0.44
HOXC10Q9NYD6 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.83■□□□□ 0.44
HOXC10Q9NYD6 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HOXC10Q9NYD6 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HOXC10Q9NYD6 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
HOXC10Q9NYD6 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HOXC10Q9NYD6 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HOXC10Q9NYD6 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.82■□□□□ 0.44
HOXC10Q9NYD6 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
HOXC10Q9NYD6 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
HOXC10Q9NYD6 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.82■□□□□ 0.44
HOXC10Q9NYD6 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.82■□□□□ 0.44
HOXC10Q9NYD6 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC10Q9NYD6 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
HOXC10Q9NYD6 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC10Q9NYD6 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC10Q9NYD6 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
HOXC10Q9NYD6 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
HOXC10Q9NYD6 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC10Q9NYD6 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.82■□□□□ 0.44
HOXC10Q9NYD6 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC10Q9NYD6 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC10Q9NYD6 AL645937.2-201ENST00000396808 931 ntBASIC17.82■□□□□ 0.44
HOXC10Q9NYD6 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
HOXC10Q9NYD6 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.82■□□□□ 0.44
HOXC10Q9NYD6 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.82■□□□□ 0.44
HOXC10Q9NYD6 AC006033.1-201ENST00000440505 426 ntBASIC17.82■□□□□ 0.44
HOXC10Q9NYD6 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC10Q9NYD6 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.82■□□□□ 0.44
HOXC10Q9NYD6 AC099548.2-209ENST00000480264 625 ntBASIC17.82■□□□□ 0.44
HOXC10Q9NYD6 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.82■□□□□ 0.44
HOXC10Q9NYD6 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.82■□□□□ 0.44
HOXC10Q9NYD6 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.82■□□□□ 0.44
HOXC10Q9NYD6 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.82■□□□□ 0.44
HOXC10Q9NYD6 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC10Q9NYD6 AL022328.3-201ENST00000607943 679 ntBASIC17.82■□□□□ 0.44
HOXC10Q9NYD6 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.82■□□□□ 0.44
HOXC10Q9NYD6 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.82■□□□□ 0.44
HOXC10Q9NYD6 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC10Q9NYD6 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC10Q9NYD6 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC10Q9NYD6 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC10Q9NYD6 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC10Q9NYD6 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
HOXC10Q9NYD6 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC10Q9NYD6 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC10Q9NYD6 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
HOXC10Q9NYD6 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.81■□□□□ 0.44
HOXC10Q9NYD6 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
HOXC10Q9NYD6 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC10Q9NYD6 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
HOXC10Q9NYD6 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC10Q9NYD6 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC10Q9NYD6 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
HOXC10Q9NYD6 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC10Q9NYD6 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC10Q9NYD6 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC10Q9NYD6 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC10Q9NYD6 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
HOXC10Q9NYD6 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC10Q9NYD6 TPM3P8-201ENST00000330554 643 ntBASIC17.81■□□□□ 0.44
HOXC10Q9NYD6 RNU1-114P-201ENST00000365297 166 ntBASIC17.81■□□□□ 0.44
HOXC10Q9NYD6 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
HOXC10Q9NYD6 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.81■□□□□ 0.44
HOXC10Q9NYD6 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.81■□□□□ 0.44
HOXC10Q9NYD6 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.81■□□□□ 0.44
HOXC10Q9NYD6 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
HOXC10Q9NYD6 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.81■□□□□ 0.44
HOXC10Q9NYD6 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.81■□□□□ 0.44
HOXC10Q9NYD6 AC004066.1-201ENST00000502488 802 ntBASIC17.81■□□□□ 0.44
HOXC10Q9NYD6 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
HOXC10Q9NYD6 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
HOXC10Q9NYD6 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.81■□□□□ 0.44
HOXC10Q9NYD6 C2orf69P2-201ENST00000562032 1123 ntBASIC17.81■□□□□ 0.44
HOXC10Q9NYD6 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.81■□□□□ 0.44
HOXC10Q9NYD6 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.81■□□□□ 0.44
HOXC10Q9NYD6 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.81■□□□□ 0.44
HOXC10Q9NYD6 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC10Q9NYD6 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC10Q9NYD6 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC10Q9NYD6 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.81■□□□□ 0.44
HOXC10Q9NYD6 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC10Q9NYD6 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXC10Q9NYD6 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXC10Q9NYD6 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.8■□□□□ 0.44
HOXC10Q9NYD6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXC10Q9NYD6 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms