Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC68Q9H2F9 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.84■□□□□ 0.13
CCDC68Q9H2F9 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC68Q9H2F9 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CCDC68Q9H2F9 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC68Q9H2F9 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.84■□□□□ 0.13
CCDC68Q9H2F9 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC68Q9H2F9 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CCDC68Q9H2F9 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC68Q9H2F9 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.84■□□□□ 0.13
CCDC68Q9H2F9 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.84■□□□□ 0.13
CCDC68Q9H2F9 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CCDC68Q9H2F9 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.84■□□□□ 0.13
CCDC68Q9H2F9 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.84■□□□□ 0.13
CCDC68Q9H2F9 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CCDC68Q9H2F9 AL450472.2-201ENST00000603663 1156 ntBASIC15.84■□□□□ 0.13
CCDC68Q9H2F9 AC003101.2-201ENST00000612557 442 ntBASIC15.84■□□□□ 0.13
CCDC68Q9H2F9 AC018529.1-201ENST00000613063 361 ntBASIC15.84■□□□□ 0.13
CCDC68Q9H2F9 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CCDC68Q9H2F9 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CCDC68Q9H2F9 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.84■□□□□ 0.13
CCDC68Q9H2F9 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC68Q9H2F9 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC68Q9H2F9 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC68Q9H2F9 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC68Q9H2F9 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC68Q9H2F9 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC68Q9H2F9 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC68Q9H2F9 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC68Q9H2F9 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC68Q9H2F9 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CCDC68Q9H2F9 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC68Q9H2F9 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CCDC68Q9H2F9 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
CCDC68Q9H2F9 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CCDC68Q9H2F9 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.83■□□□□ 0.13
CCDC68Q9H2F9 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CCDC68Q9H2F9 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
CCDC68Q9H2F9 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
CCDC68Q9H2F9 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CCDC68Q9H2F9 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
CCDC68Q9H2F9 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC68Q9H2F9 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC68Q9H2F9 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CCDC68Q9H2F9 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.83■□□□□ 0.12
CCDC68Q9H2F9 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.83■□□□□ 0.12
CCDC68Q9H2F9 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CCDC68Q9H2F9 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.83■□□□□ 0.12
CCDC68Q9H2F9 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.83■□□□□ 0.12
CCDC68Q9H2F9 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.83■□□□□ 0.12
CCDC68Q9H2F9 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.83■□□□□ 0.12
CCDC68Q9H2F9 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.83■□□□□ 0.12
CCDC68Q9H2F9 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CCDC68Q9H2F9 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.83■□□□□ 0.12
CCDC68Q9H2F9 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC68Q9H2F9 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.83■□□□□ 0.12
CCDC68Q9H2F9 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.83■□□□□ 0.12
CCDC68Q9H2F9 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.83■□□□□ 0.12
CCDC68Q9H2F9 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.83■□□□□ 0.12
CCDC68Q9H2F9 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC68Q9H2F9 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC68Q9H2F9 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.83■□□□□ 0.12
CCDC68Q9H2F9 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC68Q9H2F9 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC68Q9H2F9 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC68Q9H2F9 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CCDC68Q9H2F9 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.83■□□□□ 0.12
CCDC68Q9H2F9 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC68Q9H2F9 AC018892.3-201ENST00000623986 2499 ntBASIC15.83■□□□□ 0.12
CCDC68Q9H2F9 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC68Q9H2F9 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC68Q9H2F9 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC68Q9H2F9 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC68Q9H2F9 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC68Q9H2F9 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC68Q9H2F9 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC68Q9H2F9 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC68Q9H2F9 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CCDC68Q9H2F9 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC68Q9H2F9 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC68Q9H2F9 AC087481.3-201ENST00000602886 1894 ntBASIC15.82■□□□□ 0.12
CCDC68Q9H2F9 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC68Q9H2F9 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC68Q9H2F9 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC68Q9H2F9 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC68Q9H2F9 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC68Q9H2F9 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC68Q9H2F9 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC68Q9H2F9 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC68Q9H2F9 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC68Q9H2F9 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC68Q9H2F9 FAM58DP-201ENST00000428076 619 ntBASIC15.82■□□□□ 0.12
CCDC68Q9H2F9 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC68Q9H2F9 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC68Q9H2F9 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC68Q9H2F9 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC68Q9H2F9 AC023141.5-201ENST00000458585 616 ntBASIC15.82■□□□□ 0.12
CCDC68Q9H2F9 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC68Q9H2F9 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.82■□□□□ 0.12
CCDC68Q9H2F9 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms