Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 AC009090.5-201ENST00000624886 2285 ntBASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 SPDYE11-202ENST00000450699 704 ntBASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 SPDYE9P-201ENST00000570642 692 ntBASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 SPDYE10P-202ENST00000612005 668 ntBASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 SPDYE8P-202ENST00000612377 668 ntBASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 AC084121.4-201ENST00000641598 221 ntBASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 AC092902.6-201ENST00000641783 218 ntBASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 AF228730.8-201ENST00000642140 221 ntBASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 LINC01101-201ENST00000622953 1884 ntBASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
POLR2J3Q9H1A7 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
POLR2J3Q9H1A7 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
POLR2J3Q9H1A7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
POLR2J3Q9H1A7 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.58□□□□□ -0.07
POLR2J3Q9H1A7 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.58□□□□□ -0.07
POLR2J3Q9H1A7 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
POLR2J3Q9H1A7 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
POLR2J3Q9H1A7 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.58□□□□□ -0.07
POLR2J3Q9H1A7 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.07
POLR2J3Q9H1A7 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
POLR2J3Q9H1A7 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
POLR2J3Q9H1A7 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 FAM58CP-201ENST00000435741 640 ntBASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 PHKG1P2-201ENST00000457537 863 ntBASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms