Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC5.33□□□□□ -1.56
KRTAP4-3Q9BYR4 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP4-3Q9BYR4 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP4-3Q9BYR4 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC5.33□□□□□ -1.56
KRTAP4-3Q9BYR4 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
KRTAP4-3Q9BYR4 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP4-3Q9BYR4 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
KRTAP4-3Q9BYR4 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP4-3Q9BYR4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC5.33□□□□□ -1.56
KRTAP4-3Q9BYR4 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP4-3Q9BYR4 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP4-3Q9BYR4 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC5.33□□□□□ -1.56
KRTAP4-3Q9BYR4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP4-3Q9BYR4 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC5.33□□□□□ -1.56
KRTAP4-3Q9BYR4 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
KRTAP4-3Q9BYR4 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC5.33□□□□□ -1.56
KRTAP4-3Q9BYR4 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
KRTAP4-3Q9BYR4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP4-3Q9BYR4 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC5.33□□□□□ -1.56
KRTAP4-3Q9BYR4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP4-3Q9BYR4 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP4-3Q9BYR4 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP4-3Q9BYR4 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC5.33□□□□□ -1.56
KRTAP4-3Q9BYR4 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
KRTAP4-3Q9BYR4 FLII-221ENST00000578558 2377 ntTSL 5 BASIC5.33□□□□□ -1.56
KRTAP4-3Q9BYR4 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC5.33□□□□□ -1.56
KRTAP4-3Q9BYR4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 AP001282.1-201ENST00000531301 1499 ntBASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 BANP-204ENST00000393208 2283 ntTSL 2 BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 KRT8P22-201ENST00000562317 1415 ntBASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 BID-213ENST00000615414 2236 ntTSL 5 BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 AC026691.1-201ENST00000602502 2017 ntBASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 AL078595.1-201ENST00000404458 226 ntBASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 AC099336.1-201ENST00000417053 1171 ntBASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 USB1-202ENST00000423271 1217 ntTSL 2 BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 RPS2P32-201ENST00000439199 892 ntBASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 AC245100.5-201ENST00000452108 331 ntBASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 AC093433.1-201ENST00000458048 571 ntBASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 AC011495.1-201ENST00000498085 584 ntBASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 AC104596.2-201ENST00000512793 793 ntBASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC5.32□□□□□ -1.56
KRTAP4-3Q9BYR4 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms