Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.73
LCE3DQ9BYE3 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
LCE3DQ9BYE3 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC4.28□□□□□ -1.73
LCE3DQ9BYE3 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
LCE3DQ9BYE3 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 AC005912.2-201ENST00000619492 2400 ntBASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 AL590787.1-201ENST00000568856 1315 ntBASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 AC092127.1-201ENST00000567093 3455 ntBASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 AC005840.4-201ENST00000541242 2494 ntBASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 SPDYE21P-201ENST00000413323 827 ntBASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 AL691447.1-201ENST00000419456 387 ntBASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 CDK2AP2P3-201ENST00000422476 372 ntBASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 TSPY7P-201ENST00000431358 1114 ntBASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 AC246785.2-201ENST00000432512 513 ntBASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 RN7SL606P-201ENST00000472779 293 ntBASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC4.27□□□□□ -1.73
LCE3DQ9BYE3 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms