Protein–RNA interactions for Protein: Q9BY10

SLC46A2, Thymic stromal cotransporter homolog, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A2Q9BY10 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC46A2Q9BY10 CYP2T1P-202ENST00000641596 2535 ntBASIC16.06■□□□□ 0.16
SLC46A2Q9BY10 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC46A2Q9BY10 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC46A2Q9BY10 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC46A2Q9BY10 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 RNU1-114P-201ENST00000365297 166 ntBASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 KLF2P2-201ENST00000416807 1039 ntBASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 AC114812.1-204ENST00000449669 728 ntBASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 AC023310.1-201ENST00000554836 735 ntBASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC46A2Q9BY10 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 RN7SL560P-201ENST00000577943 264 ntBASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 MIR6787-201ENST00000616675 61 ntBASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 AC138951.2-201ENST00000623455 1161 ntBASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC46A2Q9BY10 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms