Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ABCA3Q99758 AC020916.1-201ENST00000587762 1774 ntBASIC20.29■□□□□ 0.84
ABCA3Q99758 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.29■□□□□ 0.84
ABCA3Q99758 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ABCA3Q99758 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ABCA3Q99758 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ABCA3Q99758 AC018470.1-201ENST00000624790 3129 ntBASIC20.28■□□□□ 0.84
ABCA3Q99758 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC20.28■□□□□ 0.84
ABCA3Q99758 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ABCA3Q99758 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ABCA3Q99758 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ABCA3Q99758 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC20.28■□□□□ 0.84
ABCA3Q99758 AP000356.3-201ENST00000382243 753 ntBASIC20.28■□□□□ 0.84
ABCA3Q99758 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ABCA3Q99758 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ABCA3Q99758 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC20.28■□□□□ 0.84
ABCA3Q99758 AP002803.1-201ENST00000528836 498 ntBASIC20.28■□□□□ 0.84
ABCA3Q99758 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ABCA3Q99758 PAM16-211ENST00000575848 518 ntTSL 3 BASIC20.28■□□□□ 0.84
ABCA3Q99758 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ABCA3Q99758 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC20.28■□□□□ 0.84
ABCA3Q99758 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ABCA3Q99758 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC20.28■□□□□ 0.84
ABCA3Q99758 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ABCA3Q99758 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ABCA3Q99758 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ABCA3Q99758 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ABCA3Q99758 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ABCA3Q99758 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ABCA3Q99758 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC20.27■□□□□ 0.84
ABCA3Q99758 AL139008.1-201ENST00000437894 228 ntBASIC20.27■□□□□ 0.84
ABCA3Q99758 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC20.27■□□□□ 0.84
ABCA3Q99758 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC20.27■□□□□ 0.84
ABCA3Q99758 AC008805.1-201ENST00000590892 364 ntBASIC20.27■□□□□ 0.84
ABCA3Q99758 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC20.27■□□□□ 0.84
ABCA3Q99758 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ABCA3Q99758 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ABCA3Q99758 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC20.27■□□□□ 0.84
ABCA3Q99758 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ABCA3Q99758 REXO1L4P-201ENST00000605109 1937 ntBASIC20.27■□□□□ 0.84
ABCA3Q99758 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
ABCA3Q99758 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ABCA3Q99758 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
ABCA3Q99758 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC20.27■□□□□ 0.84
ABCA3Q99758 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC20.27■□□□□ 0.84
ABCA3Q99758 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ABCA3Q99758 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ABCA3Q99758 RN7SKP230-201ENST00000365642 335 ntBASIC20.27■□□□□ 0.83
ABCA3Q99758 AK6-201ENST00000380818 1183 ntTSL 2 BASIC20.27■□□□□ 0.83
ABCA3Q99758 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC20.27■□□□□ 0.83
ABCA3Q99758 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
ABCA3Q99758 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ABCA3Q99758 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.83
ABCA3Q99758 AC073911.3-201ENST00000624401 631 ntBASIC20.27■□□□□ 0.83
ABCA3Q99758 AC127024.7-201ENST00000625101 200 ntBASIC20.27■□□□□ 0.83
ABCA3Q99758 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ABCA3Q99758 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ABCA3Q99758 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ABCA3Q99758 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ABCA3Q99758 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ABCA3Q99758 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ABCA3Q99758 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC20.26■□□□□ 0.83
ABCA3Q99758 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.26■□□□□ 0.83
ABCA3Q99758 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ABCA3Q99758 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ABCA3Q99758 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ABCA3Q99758 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ABCA3Q99758 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
ABCA3Q99758 RN7SL818P-201ENST00000485099 259 ntBASIC20.26■□□□□ 0.83
ABCA3Q99758 DNM1P30-201ENST00000563586 452 ntBASIC20.26■□□□□ 0.83
ABCA3Q99758 AC026803.1-201ENST00000569130 274 ntBASIC20.26■□□□□ 0.83
ABCA3Q99758 RN7SL725P-201ENST00000606439 259 ntBASIC20.26■□□□□ 0.83
ABCA3Q99758 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ABCA3Q99758 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ABCA3Q99758 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ABCA3Q99758 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ABCA3Q99758 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ABCA3Q99758 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ABCA3Q99758 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ABCA3Q99758 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ABCA3Q99758 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ABCA3Q99758 MST1L-201ENST00000442552 2185 ntBASIC20.26■□□□□ 0.83
ABCA3Q99758 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ABCA3Q99758 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC20.26■□□□□ 0.83
ABCA3Q99758 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ABCA3Q99758 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
ABCA3Q99758 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
ABCA3Q99758 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC20.25■□□□□ 0.83
ABCA3Q99758 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ABCA3Q99758 AL512430.1-201ENST00000392575 860 ntBASIC20.25■□□□□ 0.83
ABCA3Q99758 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ABCA3Q99758 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ABCA3Q99758 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ABCA3Q99758 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ABCA3Q99758 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ABCA3Q99758 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC20.25■□□□□ 0.83
ABCA3Q99758 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC20.25■□□□□ 0.83
ABCA3Q99758 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC20.25■□□□□ 0.83
ABCA3Q99758 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ABCA3Q99758 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms