Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 MVK-214ENST00000629016 1591 ntTSL 5 BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 REEP5-205ENST00000504247 480 ntTSL 5 BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 PAM16-211ENST00000575848 518 ntTSL 3 BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 AC002472.3-201ENST00000640124 621 ntBASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 PCDHA12-202ENST00000613593 2588 ntBASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 RN7SL163P-201ENST00000583100 276 ntBASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 AC138696.2-201ENST00000607376 223 ntBASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 FKBP4P6-201ENST00000457486 1332 ntBASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 AC006122.1-201ENST00000493323 440 ntBASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 AC107464.3-201ENST00000609172 737 ntBASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 AC084781.1-201ENST00000613737 656 ntBASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 AC055811.4-201ENST00000624039 1754 ntBASIC10.28□□□□□ -0.76
ALMS1Q8TCU4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
ALMS1Q8TCU4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
ALMS1Q8TCU4 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
ALMS1Q8TCU4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.76
ALMS1Q8TCU4 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC10.27□□□□□ -0.76
ALMS1Q8TCU4 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
ALMS1Q8TCU4 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
ALMS1Q8TCU4 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC10.27□□□□□ -0.76
ALMS1Q8TCU4 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC10.27□□□□□ -0.76
ALMS1Q8TCU4 AC027237.1-201ENST00000560942 655 ntBASIC10.27□□□□□ -0.76
ALMS1Q8TCU4 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC10.27□□□□□ -0.76
ALMS1Q8TCU4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.76
ALMS1Q8TCU4 AC011676.5-201ENST00000624864 2660 ntBASIC10.27□□□□□ -0.77
ALMS1Q8TCU4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC10.27□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms