Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 LINC02199-201ENST00000506655 2702 ntBASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 PCDHB19P-201ENST00000570871 2371 ntBASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 Z93015.1-201ENST00000451718 390 ntBASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 AC138951.2-201ENST00000623455 1161 ntBASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 PPA1-206ENST00000625364 644 ntTSL 5 BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.54■□□□□ 0.08
TMEFF1Q8IYR6 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 AC145423.3-201ENST00000615987 467 ntBASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms