Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 AC148477.4-201ENST00000613430 1793 ntBASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 PCDHA12-202ENST00000613593 2588 ntBASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 APOA2-204ENST00000464492 530 ntTSL 3 BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 AC091804.1-201ENST00000486888 567 ntBASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS4Q8IUM7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
NPAS4Q8IUM7 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS4Q8IUM7 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS4Q8IUM7 LRRC59-203ENST00000576448 1531 ntBASIC16.66■□□□□ 0.26
NPAS4Q8IUM7 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS4Q8IUM7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS4Q8IUM7 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS4Q8IUM7 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS4Q8IUM7 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NPAS4Q8IUM7 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS4Q8IUM7 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS4Q8IUM7 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS4Q8IUM7 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS4Q8IUM7 AL645937.2-201ENST00000396808 931 ntBASIC16.66■□□□□ 0.26
NPAS4Q8IUM7 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.66■□□□□ 0.26
NPAS4Q8IUM7 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.66■□□□□ 0.26
NPAS4Q8IUM7 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.66■□□□□ 0.26
NPAS4Q8IUM7 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.66■□□□□ 0.26
NPAS4Q8IUM7 CNN2P10-201ENST00000443067 918 ntBASIC16.66■□□□□ 0.26
NPAS4Q8IUM7 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.66■□□□□ 0.26
NPAS4Q8IUM7 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
NPAS4Q8IUM7 SCARNA20.5-201ENST00000516991 142 ntBASIC16.66■□□□□ 0.26
NPAS4Q8IUM7 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.66■□□□□ 0.26
NPAS4Q8IUM7 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.66■□□□□ 0.26
NPAS4Q8IUM7 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.66■□□□□ 0.26
NPAS4Q8IUM7 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.66■□□□□ 0.26
NPAS4Q8IUM7 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NPAS4Q8IUM7 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS4Q8IUM7 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.66■□□□□ 0.26
NPAS4Q8IUM7 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS4Q8IUM7 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS4Q8IUM7 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.66■□□□□ 0.26
NPAS4Q8IUM7 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS4Q8IUM7 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS4Q8IUM7 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
NPAS4Q8IUM7 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS4Q8IUM7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.66■□□□□ 0.26
NPAS4Q8IUM7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS4Q8IUM7 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS4Q8IUM7 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
NPAS4Q8IUM7 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
NPAS4Q8IUM7 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS4Q8IUM7 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.65■□□□□ 0.26
NPAS4Q8IUM7 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
NPAS4Q8IUM7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS4Q8IUM7 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS4Q8IUM7 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS4Q8IUM7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.65■□□□□ 0.26
NPAS4Q8IUM7 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NPAS4Q8IUM7 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS4Q8IUM7 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS4Q8IUM7 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS4Q8IUM7 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS4Q8IUM7 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
NPAS4Q8IUM7 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.65■□□□□ 0.26
NPAS4Q8IUM7 SLC25A24P2-201ENST00000415059 510 ntBASIC16.65■□□□□ 0.26
NPAS4Q8IUM7 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.65■□□□□ 0.26
NPAS4Q8IUM7 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.65■□□□□ 0.26
NPAS4Q8IUM7 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.65■□□□□ 0.26
NPAS4Q8IUM7 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.65■□□□□ 0.26
NPAS4Q8IUM7 AKR7A2P1-201ENST00000460134 915 ntBASIC16.65■□□□□ 0.26
NPAS4Q8IUM7 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms