Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CSMD3Q7Z407 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CSMD3Q7Z407 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CSMD3Q7Z407 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CSMD3Q7Z407 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CSMD3Q7Z407 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
CSMD3Q7Z407 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CSMD3Q7Z407 AC106820.3-201ENST00000561653 397 ntBASIC10.71□□□□□ -0.69
CSMD3Q7Z407 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC10.71□□□□□ -0.69
CSMD3Q7Z407 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC10.71□□□□□ -0.69
CSMD3Q7Z407 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
CSMD3Q7Z407 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC10.71□□□□□ -0.7
CSMD3Q7Z407 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
CSMD3Q7Z407 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC10.71□□□□□ -0.7
CSMD3Q7Z407 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.7
CSMD3Q7Z407 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.7
CSMD3Q7Z407 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
CSMD3Q7Z407 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
CSMD3Q7Z407 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
CSMD3Q7Z407 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
CSMD3Q7Z407 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
CSMD3Q7Z407 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.7
CSMD3Q7Z407 HNRNPA1P63-201ENST00000427917 963 ntBASIC10.71□□□□□ -0.7
CSMD3Q7Z407 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC10.71□□□□□ -0.7
CSMD3Q7Z407 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
CSMD3Q7Z407 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
CSMD3Q7Z407 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC10.71□□□□□ -0.7
CSMD3Q7Z407 GPR39-203ENST00000622084 900 ntTSL 5 BASIC10.71□□□□□ -0.7
CSMD3Q7Z407 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
CSMD3Q7Z407 AC084018.2-201ENST00000613093 2607 ntBASIC10.7□□□□□ -0.7
CSMD3Q7Z407 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 CRCP-204ENST00000398684 492 ntTSL 2 BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 AC244157.2-201ENST00000616239 1006 ntBASIC10.7□□□□□ -0.7
CSMD3Q7Z407 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 KRT8P4-201ENST00000509735 1454 ntBASIC10.7□□□□□ -0.7
CSMD3Q7Z407 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 KRT8P14-201ENST00000414254 1442 ntBASIC10.7□□□□□ -0.7
CSMD3Q7Z407 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 ACTBP8-201ENST00000403258 1108 ntBASIC10.7□□□□□ -0.7
CSMD3Q7Z407 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 IDS-203ENST00000428056 1213 ntTSL 2 BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 OARD1-204ENST00000464633 717 ntTSL 2 BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 AC100850.1-201ENST00000506768 649 ntBASIC10.7□□□□□ -0.7
CSMD3Q7Z407 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 AL136309.1-201ENST00000403917 691 ntBASIC10.7□□□□□ -0.7
CSMD3Q7Z407 DNAJB1P1-201ENST00000429417 1024 ntBASIC10.7□□□□□ -0.7
CSMD3Q7Z407 AC098935.1-201ENST00000446057 611 ntBASIC10.7□□□□□ -0.7
CSMD3Q7Z407 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 AC007881.3-201ENST00000608897 607 ntBASIC10.7□□□□□ -0.7
CSMD3Q7Z407 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CSMD3Q7Z407 AC006449.6-201ENST00000612330 2296 ntBASIC10.69□□□□□ -0.7
CSMD3Q7Z407 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms