Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.26■□□□□ 0.35
KCNA1Q09470 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.26■□□□□ 0.35
KCNA1Q09470 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.26■□□□□ 0.35
KCNA1Q09470 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KCNA1Q09470 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
KCNA1Q09470 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
KCNA1Q09470 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KCNA1Q09470 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KCNA1Q09470 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KCNA1Q09470 AC126177.1-201ENST00000547829 2218 ntBASIC17.25■□□□□ 0.35
KCNA1Q09470 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KCNA1Q09470 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.25■□□□□ 0.35
KCNA1Q09470 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
KCNA1Q09470 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
KCNA1Q09470 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.25■□□□□ 0.35
KCNA1Q09470 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KCNA1Q09470 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.25■□□□□ 0.35
KCNA1Q09470 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KCNA1Q09470 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KCNA1Q09470 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KCNA1Q09470 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
KCNA1Q09470 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KCNA1Q09470 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KCNA1Q09470 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
KCNA1Q09470 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
KCNA1Q09470 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KCNA1Q09470 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KCNA1Q09470 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KCNA1Q09470 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
KCNA1Q09470 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.25■□□□□ 0.35
KCNA1Q09470 GNAQP1-201ENST00000444815 1067 ntBASIC17.25■□□□□ 0.35
KCNA1Q09470 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
KCNA1Q09470 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KCNA1Q09470 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.25■□□□□ 0.35
KCNA1Q09470 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.25■□□□□ 0.35
KCNA1Q09470 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.25■□□□□ 0.35
KCNA1Q09470 AC092337.1-201ENST00000568699 1129 ntBASIC17.25■□□□□ 0.35
KCNA1Q09470 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.25■□□□□ 0.35
KCNA1Q09470 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.25■□□□□ 0.35
KCNA1Q09470 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.25■□□□□ 0.35
KCNA1Q09470 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.25■□□□□ 0.35
KCNA1Q09470 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.25■□□□□ 0.35
KCNA1Q09470 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
KCNA1Q09470 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KCNA1Q09470 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
KCNA1Q09470 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.25■□□□□ 0.35
KCNA1Q09470 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KCNA1Q09470 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KCNA1Q09470 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.25■□□□□ 0.35
KCNA1Q09470 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.25■□□□□ 0.35
KCNA1Q09470 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.25■□□□□ 0.35
KCNA1Q09470 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
KCNA1Q09470 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.25■□□□□ 0.35
KCNA1Q09470 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KCNA1Q09470 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.25■□□□□ 0.35
KCNA1Q09470 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.25■□□□□ 0.35
KCNA1Q09470 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KCNA1Q09470 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
KCNA1Q09470 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KCNA1Q09470 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
KCNA1Q09470 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.24■□□□□ 0.35
KCNA1Q09470 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KCNA1Q09470 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KCNA1Q09470 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
KCNA1Q09470 DBET-201ENST00000630918 3363 ntBASIC17.24■□□□□ 0.35
KCNA1Q09470 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.24■□□□□ 0.35
KCNA1Q09470 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.24■□□□□ 0.35
KCNA1Q09470 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.24■□□□□ 0.35
KCNA1Q09470 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KCNA1Q09470 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KCNA1Q09470 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KCNA1Q09470 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KCNA1Q09470 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KCNA1Q09470 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.24■□□□□ 0.35
KCNA1Q09470 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KCNA1Q09470 TOMM22P5-201ENST00000416399 439 ntBASIC17.24■□□□□ 0.35
KCNA1Q09470 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.24■□□□□ 0.35
KCNA1Q09470 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.24■□□□□ 0.35
KCNA1Q09470 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.24■□□□□ 0.35
KCNA1Q09470 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.24■□□□□ 0.35
KCNA1Q09470 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.24■□□□□ 0.35
KCNA1Q09470 SERBP1P5-201ENST00000510079 1181 ntBASIC17.24■□□□□ 0.35
KCNA1Q09470 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
KCNA1Q09470 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.24■□□□□ 0.35
KCNA1Q09470 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KCNA1Q09470 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.24■□□□□ 0.35
KCNA1Q09470 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.24■□□□□ 0.35
KCNA1Q09470 AL096865.1-201ENST00000606796 927 ntBASIC17.24■□□□□ 0.35
KCNA1Q09470 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.24■□□□□ 0.35
KCNA1Q09470 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KCNA1Q09470 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KCNA1Q09470 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
KCNA1Q09470 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KCNA1Q09470 C18orf15-201ENST00000623680 2534 ntBASIC17.24■□□□□ 0.35
KCNA1Q09470 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
KCNA1Q09470 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KCNA1Q09470 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KCNA1Q09470 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KCNA1Q09470 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
KCNA1Q09470 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms