Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
IRX3P78415 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
IRX3P78415 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC18.33■□□□□ 0.53
IRX3P78415 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
IRX3P78415 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
IRX3P78415 REXO1L8P-201ENST00000604378 1897 ntBASIC18.33■□□□□ 0.53
IRX3P78415 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
IRX3P78415 POLL-206ENST00000370172 2308 ntTSL 2 BASIC18.33■□□□□ 0.53
IRX3P78415 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
IRX3P78415 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
IRX3P78415 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
IRX3P78415 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
IRX3P78415 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.33■□□□□ 0.53
IRX3P78415 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
IRX3P78415 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
IRX3P78415 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.33■□□□□ 0.52
IRX3P78415 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
IRX3P78415 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
IRX3P78415 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
IRX3P78415 FAM21FP-201ENST00000426241 1131 ntBASIC18.33■□□□□ 0.52
IRX3P78415 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
IRX3P78415 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC18.33■□□□□ 0.52
IRX3P78415 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC18.33■□□□□ 0.52
IRX3P78415 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.33■□□□□ 0.52
IRX3P78415 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
IRX3P78415 AP001889.1-201ENST00000525414 633 ntBASIC18.33■□□□□ 0.52
IRX3P78415 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC18.33■□□□□ 0.52
IRX3P78415 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.33■□□□□ 0.52
IRX3P78415 USB1-203ENST00000539737 1212 ntTSL 2 BASIC18.33■□□□□ 0.52
IRX3P78415 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC18.33■□□□□ 0.52
IRX3P78415 AC120045.2-201ENST00000567334 178 ntBASIC18.33■□□□□ 0.52
IRX3P78415 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
IRX3P78415 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IRX3P78415 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC18.33■□□□□ 0.52
IRX3P78415 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC18.33■□□□□ 0.52
IRX3P78415 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
IRX3P78415 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
IRX3P78415 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
IRX3P78415 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
IRX3P78415 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
IRX3P78415 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IRX3P78415 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
IRX3P78415 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
IRX3P78415 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.33■□□□□ 0.52
IRX3P78415 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
IRX3P78415 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IRX3P78415 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
IRX3P78415 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IRX3P78415 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
IRX3P78415 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IRX3P78415 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IRX3P78415 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IRX3P78415 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
IRX3P78415 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IRX3P78415 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IRX3P78415 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IRX3P78415 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IRX3P78415 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.32■□□□□ 0.52
IRX3P78415 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IRX3P78415 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
IRX3P78415 MIR1908-201ENST00000410394 80 ntBASIC18.32■□□□□ 0.52
IRX3P78415 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.32■□□□□ 0.52
IRX3P78415 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.32■□□□□ 0.52
IRX3P78415 RPL7P3-201ENST00000441388 714 ntBASIC18.32■□□□□ 0.52
IRX3P78415 AL355994.2-201ENST00000447882 704 ntBASIC18.32■□□□□ 0.52
IRX3P78415 CSF2RBP1-201ENST00000447905 391 ntBASIC18.32■□□□□ 0.52
IRX3P78415 FO681548.1-201ENST00000455617 1132 ntBASIC18.32■□□□□ 0.52
IRX3P78415 VDAC1P7-201ENST00000462417 847 ntBASIC18.32■□□□□ 0.52
IRX3P78415 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IRX3P78415 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC18.32■□□□□ 0.52
IRX3P78415 AC009486.1-201ENST00000569860 813 ntBASIC18.32■□□□□ 0.52
IRX3P78415 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
IRX3P78415 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC18.32■□□□□ 0.52
IRX3P78415 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
IRX3P78415 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
IRX3P78415 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.32■□□□□ 0.52
IRX3P78415 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
IRX3P78415 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IRX3P78415 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.32■□□□□ 0.52
IRX3P78415 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC18.32■□□□□ 0.52
IRX3P78415 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
IRX3P78415 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IRX3P78415 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
IRX3P78415 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
IRX3P78415 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.32■□□□□ 0.52
IRX3P78415 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IRX3P78415 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IRX3P78415 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
IRX3P78415 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IRX3P78415 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IRX3P78415 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IRX3P78415 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IRX3P78415 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IRX3P78415 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IRX3P78415 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
IRX3P78415 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.31■□□□□ 0.52
IRX3P78415 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
IRX3P78415 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
IRX3P78415 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.31■□□□□ 0.52
IRX3P78415 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms