Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CDH12P55289 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.72□□□□□ -0.05
CDH12P55289 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH12P55289 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CDH12P55289 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH12P55289 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH12P55289 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH12P55289 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.72□□□□□ -0.05
CDH12P55289 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH12P55289 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH12P55289 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.72□□□□□ -0.05
CDH12P55289 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDH12P55289 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH12P55289 TFAMP1-201ENST00000412727 736 ntBASIC14.72□□□□□ -0.05
CDH12P55289 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.72□□□□□ -0.05
CDH12P55289 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CDH12P55289 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.72□□□□□ -0.05
CDH12P55289 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.72□□□□□ -0.05
CDH12P55289 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.72□□□□□ -0.05
CDH12P55289 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.72□□□□□ -0.05
CDH12P55289 AL135744.1-201ENST00000565098 629 ntBASIC14.72□□□□□ -0.05
CDH12P55289 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.72□□□□□ -0.05
CDH12P55289 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.72□□□□□ -0.05
CDH12P55289 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.72□□□□□ -0.05
CDH12P55289 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH12P55289 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.72□□□□□ -0.05
CDH12P55289 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH12P55289 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH12P55289 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH12P55289 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH12P55289 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CDH12P55289 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.72□□□□□ -0.05
CDH12P55289 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH12P55289 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH12P55289 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CDH12P55289 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.72□□□□□ -0.05
CDH12P55289 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CDH12P55289 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.72□□□□□ -0.05
CDH12P55289 AGAP7P-201ENST00000582299 2062 ntBASIC14.72□□□□□ -0.05
CDH12P55289 AGAP14-201ENST00000624701 2060 ntBASIC14.72□□□□□ -0.05
CDH12P55289 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.72□□□□□ -0.05
CDH12P55289 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH12P55289 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH12P55289 SBF1P1-201ENST00000444527 5631 ntBASIC14.72□□□□□ -0.05
CDH12P55289 LINC01101-201ENST00000622953 1884 ntBASIC14.72□□□□□ -0.05
CDH12P55289 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH12P55289 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH12P55289 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CDH12P55289 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CDH12P55289 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH12P55289 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH12P55289 AC127383.1-201ENST00000444697 1800 ntBASIC14.71□□□□□ -0.05
CDH12P55289 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH12P55289 SNX18-202ENST00000343017 3140 ntBASIC14.71□□□□□ -0.05
CDH12P55289 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH12P55289 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH12P55289 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH12P55289 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CDH12P55289 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH12P55289 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH12P55289 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH12P55289 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH12P55289 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
CDH12P55289 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH12P55289 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH12P55289 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH12P55289 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.71□□□□□ -0.05
CDH12P55289 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.71□□□□□ -0.05
CDH12P55289 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH12P55289 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.71□□□□□ -0.05
CDH12P55289 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.71□□□□□ -0.05
CDH12P55289 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH12P55289 AC243562.2-201ENST00000561247 970 ntBASIC14.71□□□□□ -0.05
CDH12P55289 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.71□□□□□ -0.05
CDH12P55289 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.71□□□□□ -0.05
CDH12P55289 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.71□□□□□ -0.05
CDH12P55289 AC027307.2-201ENST00000591252 911 ntBASIC14.71□□□□□ -0.05
CDH12P55289 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH12P55289 AC092902.6-201ENST00000641783 218 ntBASIC14.71□□□□□ -0.05
CDH12P55289 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.71□□□□□ -0.05
CDH12P55289 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH12P55289 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH12P55289 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH12P55289 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH12P55289 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH12P55289 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH12P55289 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH12P55289 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
CDH12P55289 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
CDH12P55289 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CDH12P55289 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.71□□□□□ -0.06
CDH12P55289 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CDH12P55289 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.71□□□□□ -0.06
CDH12P55289 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
CDH12P55289 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CDH12P55289 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
CDH12P55289 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CDH12P55289 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.71□□□□□ -0.06
CDH12P55289 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CDH12P55289 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms