Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CLTCL1P53675 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLTCL1P53675 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC21.99■■□□□ 1.11
CLTCL1P53675 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CLTCL1P53675 KRT8P4-201ENST00000509735 1454 ntBASIC21.99■■□□□ 1.11
CLTCL1P53675 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
CLTCL1P53675 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CLTCL1P53675 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLTCL1P53675 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLTCL1P53675 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC21.99■■□□□ 1.11
CLTCL1P53675 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CLTCL1P53675 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC21.99■■□□□ 1.11
CLTCL1P53675 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC21.99■■□□□ 1.11
CLTCL1P53675 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLTCL1P53675 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC21.98■■□□□ 1.11
CLTCL1P53675 NDUFAB1P1-201ENST00000404262 460 ntBASIC21.98■■□□□ 1.11
CLTCL1P53675 SLC25A24P2-201ENST00000415059 510 ntBASIC21.98■■□□□ 1.11
CLTCL1P53675 PTPA-218ENST00000435132 618 ntTSL 2 BASIC21.98■■□□□ 1.11
CLTCL1P53675 AC013355.1-201ENST00000562625 723 ntBASIC21.98■■□□□ 1.11
CLTCL1P53675 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC21.98■■□□□ 1.11
CLTCL1P53675 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CLTCL1P53675 AC105250.1-201ENST00000509378 2057 ntBASIC21.98■■□□□ 1.11
CLTCL1P53675 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CLTCL1P53675 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLTCL1P53675 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLTCL1P53675 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC21.98■■□□□ 1.11
CLTCL1P53675 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC21.98■■□□□ 1.11
CLTCL1P53675 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC21.98■■□□□ 1.11
CLTCL1P53675 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
CLTCL1P53675 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
CLTCL1P53675 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC21.98■■□□□ 1.11
CLTCL1P53675 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLTCL1P53675 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC21.98■■□□□ 1.11
CLTCL1P53675 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC21.98■■□□□ 1.11
CLTCL1P53675 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC21.98■■□□□ 1.11
CLTCL1P53675 MIR4683-201ENST00000579659 81 ntBASIC21.98■■□□□ 1.11
CLTCL1P53675 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLTCL1P53675 NDUFV2P1-201ENST00000596415 907 ntBASIC21.98■■□□□ 1.11
CLTCL1P53675 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
CLTCL1P53675 AC022748.3-201ENST00000621828 275 ntBASIC21.98■■□□□ 1.11
CLTCL1P53675 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC21.98■■□□□ 1.11
CLTCL1P53675 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLTCL1P53675 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLTCL1P53675 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CLTCL1P53675 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC21.97■■□□□ 1.11
CLTCL1P53675 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLTCL1P53675 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLTCL1P53675 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLTCL1P53675 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CLTCL1P53675 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLTCL1P53675 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLTCL1P53675 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLTCL1P53675 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CLTCL1P53675 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLTCL1P53675 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLTCL1P53675 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC21.97■■□□□ 1.11
CLTCL1P53675 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC21.97■■□□□ 1.11
CLTCL1P53675 MESTP3-201ENST00000503460 968 ntBASIC21.97■■□□□ 1.11
CLTCL1P53675 AC126915.1-201ENST00000522847 1038 ntBASIC21.97■■□□□ 1.11
CLTCL1P53675 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CLTCL1P53675 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CLTCL1P53675 AC244157.2-201ENST00000616239 1006 ntBASIC21.97■■□□□ 1.11
CLTCL1P53675 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CLTCL1P53675 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC21.97■■□□□ 1.11
CLTCL1P53675 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CLTCL1P53675 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CLTCL1P53675 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC21.97■■□□□ 1.11
CLTCL1P53675 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC21.96■■□□□ 1.11
CLTCL1P53675 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
CLTCL1P53675 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLTCL1P53675 CICP13-201ENST00000422015 2789 ntBASIC21.96■■□□□ 1.11
CLTCL1P53675 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC21.96■■□□□ 1.11
CLTCL1P53675 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CLTCL1P53675 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC21.96■■□□□ 1.11
CLTCL1P53675 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLTCL1P53675 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC21.96■■□□□ 1.11
CLTCL1P53675 AC005077.2-201ENST00000449786 690 ntBASIC21.96■■□□□ 1.11
CLTCL1P53675 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLTCL1P53675 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CLTCL1P53675 FTLP10-202ENST00000505798 471 ntBASIC21.96■■□□□ 1.11
CLTCL1P53675 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC21.96■■□□□ 1.11
CLTCL1P53675 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC21.96■■□□□ 1.11
CLTCL1P53675 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC21.96■■□□□ 1.11
CLTCL1P53675 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC21.96■■□□□ 1.11
CLTCL1P53675 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC21.96■■□□□ 1.11
CLTCL1P53675 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
CLTCL1P53675 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC21.96■■□□□ 1.11
CLTCL1P53675 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLTCL1P53675 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CLTCL1P53675 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLTCL1P53675 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CLTCL1P53675 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CLTCL1P53675 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC21.95■■□□□ 1.1
CLTCL1P53675 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLTCL1P53675 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CLTCL1P53675 HNRNPA1P63-201ENST00000427917 963 ntBASIC21.95■■□□□ 1.1
CLTCL1P53675 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CLTCL1P53675 AL358472.3-201ENST00000608147 415 ntBASIC21.95■■□□□ 1.1
CLTCL1P53675 AC097724.1-201ENST00000609581 426 ntBASIC21.95■■□□□ 1.1
CLTCL1P53675 AC138627.1-207ENST00000641560 1006 ntBASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms