Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
APOBP04114 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC9.52□□□□□ -0.89
APOBP04114 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
APOBP04114 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC9.52□□□□□ -0.89
APOBP04114 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC9.52□□□□□ -0.89
APOBP04114 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
APOBP04114 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC9.52□□□□□ -0.89
APOBP04114 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
APOBP04114 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
APOBP04114 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
APOBP04114 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC9.52□□□□□ -0.89
APOBP04114 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
APOBP04114 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
APOBP04114 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
APOBP04114 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC9.52□□□□□ -0.89
APOBP04114 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
APOBP04114 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
APOBP04114 HLA-K-203ENST00000430151 1046 ntBASIC9.52□□□□□ -0.89
APOBP04114 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC9.52□□□□□ -0.89
APOBP04114 ALG1L13P-202ENST00000519320 584 ntBASIC9.52□□□□□ -0.89
APOBP04114 C2orf69P1-201ENST00000563532 1093 ntBASIC9.52□□□□□ -0.89
APOBP04114 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC9.52□□□□□ -0.89
APOBP04114 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC9.52□□□□□ -0.89
APOBP04114 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC9.52□□□□□ -0.89
APOBP04114 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
APOBP04114 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC9.52□□□□□ -0.89
APOBP04114 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC9.52□□□□□ -0.89
APOBP04114 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC9.52□□□□□ -0.89
APOBP04114 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
APOBP04114 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
APOBP04114 RN7SKP230-201ENST00000365642 335 ntBASIC9.51□□□□□ -0.89
APOBP04114 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
APOBP04114 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC9.51□□□□□ -0.89
APOBP04114 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
APOBP04114 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC9.51□□□□□ -0.89
APOBP04114 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC9.51□□□□□ -0.89
APOBP04114 DUX4L46-201ENST00000566845 751 ntBASIC9.51□□□□□ -0.89
APOBP04114 AC006158.1-201ENST00000610661 249 ntBASIC9.51□□□□□ -0.89
APOBP04114 MME-218ENST00000625667 363 ntTSL 5 BASIC9.51□□□□□ -0.89
APOBP04114 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
APOBP04114 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
APOBP04114 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC9.51□□□□□ -0.89
APOBP04114 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC9.51□□□□□ -0.89
APOBP04114 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
APOBP04114 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
APOBP04114 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC9.51□□□□□ -0.89
APOBP04114 FLJ38576-201ENST00000623820 2459 ntBASIC9.51□□□□□ -0.89
APOBP04114 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
APOBP04114 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
APOBP04114 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
APOBP04114 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
APOBP04114 AL512430.1-201ENST00000392575 860 ntBASIC9.51□□□□□ -0.89
APOBP04114 AL157407.1-201ENST00000435784 904 ntBASIC9.51□□□□□ -0.89
APOBP04114 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC9.51□□□□□ -0.89
APOBP04114 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC9.51□□□□□ -0.89
APOBP04114 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
APOBP04114 AC244250.3-201ENST00000620749 366 ntBASIC9.51□□□□□ -0.89
APOBP04114 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC9.51□□□□□ -0.89
APOBP04114 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC9.51□□□□□ -0.89
APOBP04114 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
APOBP04114 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
APOBP04114 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC9.51□□□□□ -0.89
APOBP04114 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
APOBP04114 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
APOBP04114 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC9.51□□□□□ -0.89
APOBP04114 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
APOBP04114 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
APOBP04114 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
APOBP04114 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
APOBP04114 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
APOBP04114 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC9.51□□□□□ -0.89
APOBP04114 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC9.51□□□□□ -0.89
APOBP04114 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
APOBP04114 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC9.51□□□□□ -0.89
APOBP04114 AC138696.2-201ENST00000607376 223 ntBASIC9.51□□□□□ -0.89
APOBP04114 ETV2-207ENST00000619399 994 ntTSL 5 BASIC9.51□□□□□ -0.89
APOBP04114 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
APOBP04114 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC9.51□□□□□ -0.89
APOBP04114 AC080080.1-201ENST00000625121 2420 ntBASIC9.51□□□□□ -0.89
APOBP04114 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
APOBP04114 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
APOBP04114 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
APOBP04114 PGR-209ENST00000617858 2816 ntTSL 5 BASIC9.51□□□□□ -0.89
APOBP04114 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
APOBP04114 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
APOBP04114 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
APOBP04114 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
APOBP04114 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC9.51□□□□□ -0.89
APOBP04114 FAU-202ENST00000434372 533 ntTSL 2 BASIC9.51□□□□□ -0.89
APOBP04114 RN7SL396P-201ENST00000471086 295 ntBASIC9.51□□□□□ -0.89
APOBP04114 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC9.51□□□□□ -0.89
APOBP04114 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC9.51□□□□□ -0.89
APOBP04114 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC9.51□□□□□ -0.89
APOBP04114 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
APOBP04114 AC138466.3-201ENST00000619983 221 ntBASIC9.51□□□□□ -0.89
APOBP04114 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC9.51□□□□□ -0.89
APOBP04114 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC9.5□□□□□ -0.89
APOBP04114 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC9.5□□□□□ -0.89
APOBP04114 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
APOBP04114 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC9.5□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms