Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA1P02708 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CHRNA1P02708 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA1P02708 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.94■□□□□ 0.3
CHRNA1P02708 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.94■□□□□ 0.3
CHRNA1P02708 AC112504.1-201ENST00000623415 1841 ntBASIC16.94■□□□□ 0.3
CHRNA1P02708 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.94■□□□□ 0.3
CHRNA1P02708 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA1P02708 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA1P02708 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA1P02708 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA1P02708 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA1P02708 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CHRNA1P02708 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.94■□□□□ 0.3
CHRNA1P02708 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.94■□□□□ 0.3
CHRNA1P02708 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.94■□□□□ 0.3
CHRNA1P02708 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.94■□□□□ 0.3
CHRNA1P02708 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
CHRNA1P02708 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.94■□□□□ 0.3
CHRNA1P02708 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA1P02708 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.94■□□□□ 0.3
CHRNA1P02708 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.94■□□□□ 0.3
CHRNA1P02708 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.94■□□□□ 0.3
CHRNA1P02708 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.94■□□□□ 0.3
CHRNA1P02708 MIR4741-201ENST00000579822 90 ntBASIC16.94■□□□□ 0.3
CHRNA1P02708 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.94■□□□□ 0.3
CHRNA1P02708 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.94■□□□□ 0.3
CHRNA1P02708 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.94■□□□□ 0.3
CHRNA1P02708 AC006453.4-201ENST00000636949 1252 ntBASIC16.94■□□□□ 0.3
CHRNA1P02708 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA1P02708 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA1P02708 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA1P02708 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA1P02708 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.94■□□□□ 0.3
CHRNA1P02708 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
CHRNA1P02708 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CHRNA1P02708 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.93■□□□□ 0.3
CHRNA1P02708 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA1P02708 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA1P02708 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.93■□□□□ 0.3
CHRNA1P02708 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA1P02708 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA1P02708 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA1P02708 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA1P02708 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA1P02708 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA1P02708 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
CHRNA1P02708 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA1P02708 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA1P02708 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
CHRNA1P02708 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA1P02708 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.93■□□□□ 0.3
CHRNA1P02708 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CHRNA1P02708 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA1P02708 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.93■□□□□ 0.3
CHRNA1P02708 AC006033.1-201ENST00000440505 426 ntBASIC16.93■□□□□ 0.3
CHRNA1P02708 AC245100.3-201ENST00000441281 285 ntBASIC16.93■□□□□ 0.3
CHRNA1P02708 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.93■□□□□ 0.3
CHRNA1P02708 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.93■□□□□ 0.3
CHRNA1P02708 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.93■□□□□ 0.3
CHRNA1P02708 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CHRNA1P02708 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA1P02708 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.93■□□□□ 0.3
CHRNA1P02708 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA1P02708 PRSS30P-206ENST00000641773 873 ntBASIC16.93■□□□□ 0.3
CHRNA1P02708 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.93■□□□□ 0.3
CHRNA1P02708 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA1P02708 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.93■□□□□ 0.3
CHRNA1P02708 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CHRNA1P02708 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.93■□□□□ 0.3
CHRNA1P02708 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.93■□□□□ 0.3
CHRNA1P02708 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA1P02708 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CHRNA1P02708 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.93■□□□□ 0.3
CHRNA1P02708 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.93■□□□□ 0.3
CHRNA1P02708 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA1P02708 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA1P02708 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA1P02708 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.93■□□□□ 0.3
CHRNA1P02708 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA1P02708 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA1P02708 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CHRNA1P02708 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CHRNA1P02708 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA1P02708 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CHRNA1P02708 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.92■□□□□ 0.3
CHRNA1P02708 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA1P02708 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA1P02708 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CHRNA1P02708 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CHRNA1P02708 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.92■□□□□ 0.3
CHRNA1P02708 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.92■□□□□ 0.3
CHRNA1P02708 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA1P02708 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.92■□□□□ 0.3
CHRNA1P02708 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.92■□□□□ 0.3
CHRNA1P02708 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.92■□□□□ 0.3
CHRNA1P02708 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.92■□□□□ 0.3
CHRNA1P02708 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.92■□□□□ 0.3
CHRNA1P02708 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.92■□□□□ 0.3
CHRNA1P02708 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms