Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 SNX5-210ENST00000481323 562 ntTSL 3 BASIC12.51□□□□□ -0.41
IFNA1P01562 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
IFNA1P01562 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC12.51□□□□□ -0.41
IFNA1P01562 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC12.51□□□□□ -0.41
IFNA1P01562 AL355075.4-201ENST00000554988 638 ntBASIC12.51□□□□□ -0.41
IFNA1P01562 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC12.51□□□□□ -0.41
IFNA1P01562 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC12.51□□□□□ -0.41
IFNA1P01562 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
IFNA1P01562 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC12.51□□□□□ -0.41
IFNA1P01562 LINC01230-201ENST00000625222 3017 ntBASIC12.51□□□□□ -0.41
IFNA1P01562 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
IFNA1P01562 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
IFNA1P01562 NCF1C-201ENST00000438382 1427 ntBASIC12.51□□□□□ -0.41
IFNA1P01562 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
IFNA1P01562 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
IFNA1P01562 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
IFNA1P01562 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
IFNA1P01562 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC12.51□□□□□ -0.41
IFNA1P01562 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.51□□□□□ -0.41
IFNA1P01562 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
IFNA1P01562 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
IFNA1P01562 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
IFNA1P01562 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.51□□□□□ -0.41
IFNA1P01562 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
IFNA1P01562 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
IFNA1P01562 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
IFNA1P01562 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
IFNA1P01562 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
IFNA1P01562 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.51□□□□□ -0.41
IFNA1P01562 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.5□□□□□ -0.41
IFNA1P01562 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
IFNA1P01562 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
IFNA1P01562 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
IFNA1P01562 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
IFNA1P01562 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
IFNA1P01562 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.5□□□□□ -0.41
IFNA1P01562 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
IFNA1P01562 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.5□□□□□ -0.41
IFNA1P01562 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
IFNA1P01562 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
IFNA1P01562 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
IFNA1P01562 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
IFNA1P01562 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.5□□□□□ -0.41
IFNA1P01562 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
IFNA1P01562 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
IFNA1P01562 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC12.5□□□□□ -0.41
IFNA1P01562 AL645939.2-201ENST00000427340 991 ntBASIC12.5□□□□□ -0.41
IFNA1P01562 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC12.5□□□□□ -0.41
IFNA1P01562 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC12.5□□□□□ -0.41
IFNA1P01562 AC087163.2-201ENST00000457299 853 ntBASIC12.5□□□□□ -0.41
IFNA1P01562 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
IFNA1P01562 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC12.5□□□□□ -0.41
IFNA1P01562 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC12.5□□□□□ -0.41
IFNA1P01562 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC12.5□□□□□ -0.41
IFNA1P01562 LINC01023-201ENST00000606054 436 ntBASIC12.5□□□□□ -0.41
IFNA1P01562 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC12.5□□□□□ -0.41
IFNA1P01562 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC12.5□□□□□ -0.41
IFNA1P01562 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
IFNA1P01562 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
IFNA1P01562 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
IFNA1P01562 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
IFNA1P01562 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
IFNA1P01562 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
IFNA1P01562 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC12.5□□□□□ -0.41
IFNA1P01562 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC12.5□□□□□ -0.41
IFNA1P01562 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC12.5□□□□□ -0.41
IFNA1P01562 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
IFNA1P01562 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
IFNA1P01562 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.5□□□□□ -0.41
IFNA1P01562 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
IFNA1P01562 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.5□□□□□ -0.41
IFNA1P01562 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
IFNA1P01562 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
IFNA1P01562 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
IFNA1P01562 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
IFNA1P01562 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
IFNA1P01562 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
IFNA1P01562 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
IFNA1P01562 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
IFNA1P01562 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC12.5□□□□□ -0.41
IFNA1P01562 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
IFNA1P01562 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
IFNA1P01562 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.49□□□□□ -0.41
IFNA1P01562 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IFNA1P01562 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IFNA1P01562 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
IFNA1P01562 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.49□□□□□ -0.41
IFNA1P01562 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IFNA1P01562 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
IFNA1P01562 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IFNA1P01562 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
IFNA1P01562 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
IFNA1P01562 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
IFNA1P01562 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
IFNA1P01562 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
IFNA1P01562 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
IFNA1P01562 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC12.49□□□□□ -0.41
IFNA1P01562 TKT-202ENST00000423516 2075 ntTSL 2 BASIC12.49□□□□□ -0.41
IFNA1P01562 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IFNA1P01562 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms