Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 THTPA-204ENST00000554970 569 ntTSL 4 BASIC12.34□□□□□ -0.43
ZNF253O75346 THTPA-206ENST00000556015 535 ntTSL 3 BASIC12.34□□□□□ -0.43
ZNF253O75346 QPRT-203ENST00000562473 579 ntTSL 3 BASIC12.34□□□□□ -0.43
ZNF253O75346 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
ZNF253O75346 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC12.34□□□□□ -0.43
ZNF253O75346 CLEC4GP1-201ENST00000596555 870 ntBASIC12.34□□□□□ -0.43
ZNF253O75346 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
ZNF253O75346 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC12.34□□□□□ -0.43
ZNF253O75346 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF253O75346 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF253O75346 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC12.34□□□□□ -0.43
ZNF253O75346 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF253O75346 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF253O75346 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
ZNF253O75346 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF253O75346 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF253O75346 AC117489.1-201ENST00000625169 3217 ntBASIC12.34□□□□□ -0.43
ZNF253O75346 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
ZNF253O75346 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC12.34□□□□□ -0.43
ZNF253O75346 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC12.34□□□□□ -0.43
ZNF253O75346 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF253O75346 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF253O75346 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
ZNF253O75346 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.34□□□□□ -0.43
ZNF253O75346 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF253O75346 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF253O75346 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF253O75346 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF253O75346 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.34□□□□□ -0.43
ZNF253O75346 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
ZNF253O75346 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.34□□□□□ -0.43
ZNF253O75346 AL731571.1-201ENST00000617058 5428 ntBASIC12.34□□□□□ -0.43
ZNF253O75346 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF253O75346 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.34□□□□□ -0.43
ZNF253O75346 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF253O75346 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC12.34□□□□□ -0.43
ZNF253O75346 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ZNF253O75346 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.33□□□□□ -0.43
ZNF253O75346 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
ZNF253O75346 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF253O75346 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF253O75346 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF253O75346 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC12.33□□□□□ -0.44
ZNF253O75346 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF253O75346 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF253O75346 RELA-227ENST00000615805 2236 ntTSL 5 BASIC12.33□□□□□ -0.44
ZNF253O75346 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF253O75346 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
ZNF253O75346 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
ZNF253O75346 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF253O75346 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF253O75346 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF253O75346 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF253O75346 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF253O75346 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF253O75346 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC12.33□□□□□ -0.44
ZNF253O75346 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC12.33□□□□□ -0.44
ZNF253O75346 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
ZNF253O75346 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC12.33□□□□□ -0.44
ZNF253O75346 AL513480.1-201ENST00000451731 511 ntBASIC12.33□□□□□ -0.44
ZNF253O75346 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
ZNF253O75346 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC12.33□□□□□ -0.44
ZNF253O75346 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF253O75346 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC12.33□□□□□ -0.44
ZNF253O75346 IFNL4P1-201ENST00000607083 540 ntBASIC12.33□□□□□ -0.44
ZNF253O75346 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC12.33□□□□□ -0.44
ZNF253O75346 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
ZNF253O75346 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF253O75346 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF253O75346 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF253O75346 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
ZNF253O75346 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
ZNF253O75346 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
ZNF253O75346 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC12.33□□□□□ -0.44
ZNF253O75346 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.33□□□□□ -0.44
ZNF253O75346 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF253O75346 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF253O75346 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF253O75346 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
ZNF253O75346 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.33□□□□□ -0.44
ZNF253O75346 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF253O75346 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF253O75346 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
ZNF253O75346 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF253O75346 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF253O75346 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF253O75346 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.33□□□□□ -0.44
ZNF253O75346 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
ZNF253O75346 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
ZNF253O75346 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.32□□□□□ -0.44
ZNF253O75346 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF253O75346 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC12.32□□□□□ -0.44
ZNF253O75346 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC12.32□□□□□ -0.44
ZNF253O75346 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF253O75346 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF253O75346 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF253O75346 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC12.32□□□□□ -0.44
ZNF253O75346 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF253O75346 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF253O75346 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms