Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
XRCC2O43543 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.72□□□□□ -0.21
XRCC2O43543 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
XRCC2O43543 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.72□□□□□ -0.21
XRCC2O43543 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
XRCC2O43543 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
XRCC2O43543 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
XRCC2O43543 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
XRCC2O43543 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
XRCC2O43543 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
XRCC2O43543 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.72□□□□□ -0.21
XRCC2O43543 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
XRCC2O43543 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
XRCC2O43543 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
XRCC2O43543 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
XRCC2O43543 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
XRCC2O43543 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
XRCC2O43543 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
XRCC2O43543 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.72□□□□□ -0.21
XRCC2O43543 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
XRCC2O43543 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
XRCC2O43543 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
XRCC2O43543 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
XRCC2O43543 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
XRCC2O43543 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
XRCC2O43543 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.72□□□□□ -0.21
XRCC2O43543 MTND6P24-201ENST00000440466 518 ntBASIC13.72□□□□□ -0.21
XRCC2O43543 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.72□□□□□ -0.21
XRCC2O43543 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
XRCC2O43543 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.72□□□□□ -0.21
XRCC2O43543 AL512356.2-201ENST00000546955 174 ntBASIC13.72□□□□□ -0.21
XRCC2O43543 HNRNPUP1-201ENST00000554987 333 ntBASIC13.72□□□□□ -0.21
XRCC2O43543 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.72□□□□□ -0.21
XRCC2O43543 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.72□□□□□ -0.21
XRCC2O43543 AC134684.3-201ENST00000641758 218 ntBASIC13.72□□□□□ -0.21
XRCC2O43543 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
XRCC2O43543 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
XRCC2O43543 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
XRCC2O43543 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.72□□□□□ -0.21
XRCC2O43543 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
XRCC2O43543 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
XRCC2O43543 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
XRCC2O43543 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
XRCC2O43543 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
XRCC2O43543 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
XRCC2O43543 AC013268.4-201ENST00000637413 2228 ntBASIC13.72□□□□□ -0.21
XRCC2O43543 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
XRCC2O43543 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.72□□□□□ -0.21
XRCC2O43543 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.72□□□□□ -0.21
XRCC2O43543 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
XRCC2O43543 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
XRCC2O43543 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
XRCC2O43543 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.72□□□□□ -0.21
XRCC2O43543 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
XRCC2O43543 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.72□□□□□ -0.21
XRCC2O43543 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
XRCC2O43543 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
XRCC2O43543 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
XRCC2O43543 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.72□□□□□ -0.21
XRCC2O43543 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
XRCC2O43543 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
XRCC2O43543 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
XRCC2O43543 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
XRCC2O43543 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.71□□□□□ -0.21
XRCC2O43543 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
XRCC2O43543 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
XRCC2O43543 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
XRCC2O43543 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.71□□□□□ -0.21
XRCC2O43543 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
XRCC2O43543 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
XRCC2O43543 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.71□□□□□ -0.21
XRCC2O43543 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
XRCC2O43543 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
XRCC2O43543 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
XRCC2O43543 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
XRCC2O43543 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
XRCC2O43543 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
XRCC2O43543 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.71□□□□□ -0.21
XRCC2O43543 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.71□□□□□ -0.21
XRCC2O43543 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
XRCC2O43543 AZGP1P1-201ENST00000411909 902 ntBASIC13.71□□□□□ -0.21
XRCC2O43543 AC136604.1-201ENST00000418535 575 ntBASIC13.71□□□□□ -0.21
XRCC2O43543 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.71□□□□□ -0.21
XRCC2O43543 AL645939.2-201ENST00000427340 991 ntBASIC13.71□□□□□ -0.21
XRCC2O43543 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.71□□□□□ -0.21
XRCC2O43543 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
XRCC2O43543 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.71□□□□□ -0.21
XRCC2O43543 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
XRCC2O43543 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
XRCC2O43543 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.71□□□□□ -0.21
XRCC2O43543 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
XRCC2O43543 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
XRCC2O43543 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.71□□□□□ -0.21
XRCC2O43543 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
XRCC2O43543 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
XRCC2O43543 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
XRCC2O43543 AC092127.1-201ENST00000567093 3455 ntBASIC13.71□□□□□ -0.22
XRCC2O43543 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
XRCC2O43543 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
XRCC2O43543 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms