Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMAD6O43541 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SMAD6O43541 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMAD6O43541 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMAD6O43541 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMAD6O43541 TMEM14DP-201ENST00000422205 345 ntBASIC15.81■□□□□ 0.12
SMAD6O43541 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.81■□□□□ 0.12
SMAD6O43541 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SMAD6O43541 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.81■□□□□ 0.12
SMAD6O43541 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.81■□□□□ 0.12
SMAD6O43541 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.81■□□□□ 0.12
SMAD6O43541 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.81■□□□□ 0.12
SMAD6O43541 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.81■□□□□ 0.12
SMAD6O43541 DRD5P1-201ENST00000456605 1438 ntBASIC15.81■□□□□ 0.12
SMAD6O43541 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.81■□□□□ 0.12
SMAD6O43541 AC105250.1-201ENST00000509378 2057 ntBASIC15.81■□□□□ 0.12
SMAD6O43541 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SMAD6O43541 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SMAD6O43541 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
SMAD6O43541 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
SMAD6O43541 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMAD6O43541 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SMAD6O43541 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.81■□□□□ 0.12
SMAD6O43541 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.81■□□□□ 0.12
SMAD6O43541 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.81■□□□□ 0.12
SMAD6O43541 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SMAD6O43541 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.81■□□□□ 0.12
SMAD6O43541 AC046158.3-201ENST00000624947 2558 ntBASIC15.81■□□□□ 0.12
SMAD6O43541 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.81■□□□□ 0.12
SMAD6O43541 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
SMAD6O43541 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMAD6O43541 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SMAD6O43541 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.81■□□□□ 0.12
SMAD6O43541 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMAD6O43541 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.81■□□□□ 0.12
SMAD6O43541 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMAD6O43541 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.8■□□□□ 0.12
SMAD6O43541 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
SMAD6O43541 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.8■□□□□ 0.12
SMAD6O43541 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMAD6O43541 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMAD6O43541 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMAD6O43541 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SMAD6O43541 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMAD6O43541 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.8■□□□□ 0.12
SMAD6O43541 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMAD6O43541 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SMAD6O43541 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SMAD6O43541 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMAD6O43541 KRT8P22-201ENST00000562317 1415 ntBASIC15.8■□□□□ 0.12
SMAD6O43541 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.8■□□□□ 0.12
SMAD6O43541 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SMAD6O43541 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.8■□□□□ 0.12
SMAD6O43541 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.8■□□□□ 0.12
SMAD6O43541 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.8■□□□□ 0.12
SMAD6O43541 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SMAD6O43541 AC026410.3-201ENST00000514280 936 ntBASIC15.8■□□□□ 0.12
SMAD6O43541 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.8■□□□□ 0.12
SMAD6O43541 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
SMAD6O43541 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.8■□□□□ 0.12
SMAD6O43541 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.8■□□□□ 0.12
SMAD6O43541 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.8■□□□□ 0.12
SMAD6O43541 AC010319.3-201ENST00000597028 470 ntBASIC15.8■□□□□ 0.12
SMAD6O43541 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SMAD6O43541 CU634019.7-201ENST00000624153 1185 ntBASIC15.8■□□□□ 0.12
SMAD6O43541 FP236241.2-201ENST00000624906 1185 ntBASIC15.8■□□□□ 0.12
SMAD6O43541 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.8■□□□□ 0.12
SMAD6O43541 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.8■□□□□ 0.12
SMAD6O43541 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMAD6O43541 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMAD6O43541 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMAD6O43541 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
SMAD6O43541 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMAD6O43541 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SMAD6O43541 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMAD6O43541 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMAD6O43541 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
SMAD6O43541 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SMAD6O43541 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMAD6O43541 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SMAD6O43541 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMAD6O43541 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMAD6O43541 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMAD6O43541 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.79■□□□□ 0.12
SMAD6O43541 AC022188.1-201ENST00000620960 1664 ntBASIC15.79■□□□□ 0.12
SMAD6O43541 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.79■□□□□ 0.12
SMAD6O43541 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMAD6O43541 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SMAD6O43541 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.79■□□□□ 0.12
SMAD6O43541 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMAD6O43541 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMAD6O43541 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.79■□□□□ 0.12
SMAD6O43541 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMAD6O43541 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SMAD6O43541 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMAD6O43541 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SMAD6O43541 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SMAD6O43541 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
SMAD6O43541 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.79■□□□□ 0.12
SMAD6O43541 C1QBPP1-201ENST00000400117 770 ntBASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms