Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC18.73■□□□□ 0.59
FOXN1O15353 AC069218.1-201ENST00000435269 762 ntBASIC18.73■□□□□ 0.59
FOXN1O15353 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC18.73■□□□□ 0.59
FOXN1O15353 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
FOXN1O15353 AC106760.1-201ENST00000508690 800 ntBASIC18.73■□□□□ 0.59
FOXN1O15353 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.73■□□□□ 0.59
FOXN1O15353 RPL8-205ENST00000527914 551 ntTSL 3 BASIC18.73■□□□□ 0.59
FOXN1O15353 AC023310.1-201ENST00000554836 735 ntBASIC18.73■□□□□ 0.59
FOXN1O15353 AC036164.1-201ENST00000570544 333 ntBASIC18.73■□□□□ 0.59
FOXN1O15353 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC18.73■□□□□ 0.59
FOXN1O15353 AL049840.4-201ENST00000602422 811 ntBASIC18.73■□□□□ 0.59
FOXN1O15353 AC005702.4-201ENST00000618393 416 ntBASIC18.73■□□□□ 0.59
FOXN1O15353 AL353726.2-201ENST00000623259 884 ntBASIC18.73■□□□□ 0.59
FOXN1O15353 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC18.73■□□□□ 0.59
FOXN1O15353 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.73■□□□□ 0.59
FOXN1O15353 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FOXN1O15353 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.73■□□□□ 0.59
FOXN1O15353 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
FOXN1O15353 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
FOXN1O15353 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXN1O15353 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
FOXN1O15353 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXN1O15353 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
FOXN1O15353 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.73■□□□□ 0.59
FOXN1O15353 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXN1O15353 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
FOXN1O15353 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC18.73■□□□□ 0.59
FOXN1O15353 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.73■□□□□ 0.59
FOXN1O15353 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.73■□□□□ 0.59
FOXN1O15353 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.73■□□□□ 0.59
FOXN1O15353 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.72■□□□□ 0.59
FOXN1O15353 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.72■□□□□ 0.59
FOXN1O15353 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
FOXN1O15353 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.72■□□□□ 0.59
FOXN1O15353 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
FOXN1O15353 AL596087.1-201ENST00000400979 1969 ntBASIC18.72■□□□□ 0.59
FOXN1O15353 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN1O15353 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC18.72■□□□□ 0.59
FOXN1O15353 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN1O15353 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN1O15353 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.72■□□□□ 0.59
FOXN1O15353 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC18.72■□□□□ 0.59
FOXN1O15353 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC18.72■□□□□ 0.59
FOXN1O15353 AC104982.3-201ENST00000581995 514 ntBASIC18.72■□□□□ 0.59
FOXN1O15353 NAT9-222ENST00000583476 583 ntTSL 3 BASIC18.72■□□□□ 0.59
FOXN1O15353 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
FOXN1O15353 NDUFV2P1-201ENST00000596415 907 ntBASIC18.72■□□□□ 0.59
FOXN1O15353 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.72■□□□□ 0.59
FOXN1O15353 AL391069.4-201ENST00000609583 481 ntBASIC18.72■□□□□ 0.59
FOXN1O15353 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.72■□□□□ 0.59
FOXN1O15353 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.72■□□□□ 0.59
FOXN1O15353 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
FOXN1O15353 CU633904.3-201ENST00000624042 1029 ntBASIC18.72■□□□□ 0.59
FOXN1O15353 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.72■□□□□ 0.59
FOXN1O15353 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN1O15353 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN1O15353 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.72■□□□□ 0.59
FOXN1O15353 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN1O15353 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN1O15353 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
FOXN1O15353 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.72■□□□□ 0.59
FOXN1O15353 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN1O15353 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.72■□□□□ 0.59
FOXN1O15353 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.72■□□□□ 0.59
FOXN1O15353 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN1O15353 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN1O15353 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.72■□□□□ 0.59
FOXN1O15353 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN1O15353 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN1O15353 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.71■□□□□ 0.59
FOXN1O15353 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FOXN1O15353 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXN1O15353 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18.71■□□□□ 0.59
FOXN1O15353 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXN1O15353 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.71■□□□□ 0.59
FOXN1O15353 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.71■□□□□ 0.59
FOXN1O15353 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.71■□□□□ 0.59
FOXN1O15353 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FOXN1O15353 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FOXN1O15353 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.71■□□□□ 0.59
FOXN1O15353 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FOXN1O15353 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
FOXN1O15353 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
FOXN1O15353 BAATP1-201ENST00000412284 1225 ntBASIC18.71■□□□□ 0.59
FOXN1O15353 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC18.71■□□□□ 0.59
FOXN1O15353 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC18.71■□□□□ 0.59
FOXN1O15353 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
FOXN1O15353 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.71■□□□□ 0.59
FOXN1O15353 ENPP7P5-201ENST00000541031 1031 ntBASIC18.71■□□□□ 0.59
FOXN1O15353 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
FOXN1O15353 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FOXN1O15353 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.71■□□□□ 0.59
FOXN1O15353 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.71■□□□□ 0.59
FOXN1O15353 AC026979.3-201ENST00000607315 403 ntBASIC18.71■□□□□ 0.59
FOXN1O15353 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXN1O15353 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.71■□□□□ 0.59
FOXN1O15353 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FOXN1O15353 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXN1O15353 AHCYP2-201ENST00000430630 1300 ntBASIC18.71■□□□□ 0.59
FOXN1O15353 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms