Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 AL591163.1-201ENST00000641757 987 ntBASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 KRT8P37-201ENST00000451609 1420 ntBASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 AZGP1P1-201ENST00000411909 902 ntBASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 AC092337.1-201ENST00000568699 1129 ntBASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 AC093726.1-201ENST00000608064 963 ntBASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 IGHV3-72-202ENST00000621503 303 ntBASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 LINC02199-201ENST00000506655 2702 ntBASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA3F8WFD2 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NPIPA3F8WFD2 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
NPIPA3F8WFD2 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPA3F8WFD2 AC134407.2-201ENST00000625089 1978 ntBASIC14.34□□□□□ -0.11
NPIPA3F8WFD2 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPA3F8WFD2 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPA3F8WFD2 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
NPIPA3F8WFD2 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPA3F8WFD2 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.34□□□□□ -0.11
NPIPA3F8WFD2 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NPIPA3F8WFD2 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPA3F8WFD2 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NPIPA3F8WFD2 AC008741.2-201ENST00000612792 3115 ntBASIC14.34□□□□□ -0.11
NPIPA3F8WFD2 AC008894.3-201ENST00000624324 3103 ntBASIC14.34□□□□□ -0.11
NPIPA3F8WFD2 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPA3F8WFD2 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
NPIPA3F8WFD2 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPA3F8WFD2 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.34□□□□□ -0.11
NPIPA3F8WFD2 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.34□□□□□ -0.11
NPIPA3F8WFD2 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NPIPA3F8WFD2 CTBP2P3-201ENST00000585629 1255 ntBASIC14.34□□□□□ -0.11
NPIPA3F8WFD2 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.34□□□□□ -0.11
NPIPA3F8WFD2 AC099568.2-201ENST00000609194 695 ntBASIC14.34□□□□□ -0.11
NPIPA3F8WFD2 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPA3F8WFD2 AC010491.1-201ENST00000563101 2797 ntBASIC14.34□□□□□ -0.11
NPIPA3F8WFD2 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.34□□□□□ -0.11
NPIPA3F8WFD2 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NPIPA3F8WFD2 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NPIPA3F8WFD2 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPA3F8WFD2 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPA3F8WFD2 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPA3F8WFD2 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPA3F8WFD2 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms