Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HCFC2Q9Y5Z7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HCFC2Q9Y5Z7 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HCFC2Q9Y5Z7 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HCFC2Q9Y5Z7 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HCFC2Q9Y5Z7 PCDHA12-202ENST00000613593 2588 ntBASIC16.28■□□□□ 0.2
HCFC2Q9Y5Z7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.27■□□□□ 0.2
HCFC2Q9Y5Z7 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HCFC2Q9Y5Z7 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HCFC2Q9Y5Z7 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HCFC2Q9Y5Z7 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HCFC2Q9Y5Z7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
HCFC2Q9Y5Z7 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HCFC2Q9Y5Z7 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.27■□□□□ 0.2
HCFC2Q9Y5Z7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HCFC2Q9Y5Z7 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HCFC2Q9Y5Z7 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HCFC2Q9Y5Z7 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HCFC2Q9Y5Z7 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.27■□□□□ 0.2
HCFC2Q9Y5Z7 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.27■□□□□ 0.2
HCFC2Q9Y5Z7 POM121L10P-201ENST00000436994 1285 ntBASIC16.27■□□□□ 0.2
HCFC2Q9Y5Z7 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.27■□□□□ 0.2
HCFC2Q9Y5Z7 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HCFC2Q9Y5Z7 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HCFC2Q9Y5Z7 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.27■□□□□ 0.2
HCFC2Q9Y5Z7 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.27■□□□□ 0.2
HCFC2Q9Y5Z7 AC016629.1-201ENST00000596579 586 ntBASIC16.27■□□□□ 0.2
HCFC2Q9Y5Z7 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HCFC2Q9Y5Z7 AL451050.2-201ENST00000606967 682 ntBASIC16.27■□□□□ 0.2
HCFC2Q9Y5Z7 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.27■□□□□ 0.2
HCFC2Q9Y5Z7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HCFC2Q9Y5Z7 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HCFC2Q9Y5Z7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
HCFC2Q9Y5Z7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HCFC2Q9Y5Z7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HCFC2Q9Y5Z7 AL023775.1-201ENST00000454907 1746 ntBASIC16.27■□□□□ 0.19
HCFC2Q9Y5Z7 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HCFC2Q9Y5Z7 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
HCFC2Q9Y5Z7 OR6D1P-203ENST00000641209 4860 ntBASIC16.27■□□□□ 0.19
HCFC2Q9Y5Z7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HCFC2Q9Y5Z7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HCFC2Q9Y5Z7 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HCFC2Q9Y5Z7 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HCFC2Q9Y5Z7 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HCFC2Q9Y5Z7 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.27■□□□□ 0.19
HCFC2Q9Y5Z7 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HCFC2Q9Y5Z7 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.27■□□□□ 0.19
HCFC2Q9Y5Z7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
HCFC2Q9Y5Z7 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HCFC2Q9Y5Z7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC2Q9Y5Z7 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.26■□□□□ 0.19
HCFC2Q9Y5Z7 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
HCFC2Q9Y5Z7 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC2Q9Y5Z7 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.26■□□□□ 0.19
HCFC2Q9Y5Z7 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC2Q9Y5Z7 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.26■□□□□ 0.19
HCFC2Q9Y5Z7 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC2Q9Y5Z7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC2Q9Y5Z7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC2Q9Y5Z7 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
HCFC2Q9Y5Z7 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC2Q9Y5Z7 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.26■□□□□ 0.19
HCFC2Q9Y5Z7 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC2Q9Y5Z7 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC2Q9Y5Z7 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
HCFC2Q9Y5Z7 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC16.26■□□□□ 0.19
HCFC2Q9Y5Z7 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC2Q9Y5Z7 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.26■□□□□ 0.19
HCFC2Q9Y5Z7 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.26■□□□□ 0.19
HCFC2Q9Y5Z7 EIF4HP1-201ENST00000453115 687 ntBASIC16.26■□□□□ 0.19
HCFC2Q9Y5Z7 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC2Q9Y5Z7 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
HCFC2Q9Y5Z7 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.26■□□□□ 0.19
HCFC2Q9Y5Z7 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.26■□□□□ 0.19
HCFC2Q9Y5Z7 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC2Q9Y5Z7 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.26■□□□□ 0.19
HCFC2Q9Y5Z7 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC2Q9Y5Z7 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.26■□□□□ 0.19
HCFC2Q9Y5Z7 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC2Q9Y5Z7 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.26■□□□□ 0.19
HCFC2Q9Y5Z7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC2Q9Y5Z7 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC2Q9Y5Z7 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
HCFC2Q9Y5Z7 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
HCFC2Q9Y5Z7 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC2Q9Y5Z7 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.26■□□□□ 0.19
HCFC2Q9Y5Z7 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC2Q9Y5Z7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
HCFC2Q9Y5Z7 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HCFC2Q9Y5Z7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HCFC2Q9Y5Z7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.25■□□□□ 0.19
HCFC2Q9Y5Z7 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
HCFC2Q9Y5Z7 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HCFC2Q9Y5Z7 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.25■□□□□ 0.19
HCFC2Q9Y5Z7 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.25■□□□□ 0.19
HCFC2Q9Y5Z7 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.25■□□□□ 0.19
HCFC2Q9Y5Z7 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC16.25■□□□□ 0.19
HCFC2Q9Y5Z7 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC16.25■□□□□ 0.19
HCFC2Q9Y5Z7 UPF3AP2-201ENST00000457924 1132 ntBASIC16.25■□□□□ 0.19
HCFC2Q9Y5Z7 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms