Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 DFFBP1-201ENST00000433250 979 ntBASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 HNRNPUP1-201ENST00000554987 333 ntBASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 CHCHD2P3-201ENST00000603038 451 ntBASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 MIR6799-201ENST00000620297 69 ntBASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHB1Q9Y5F3 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PCDHB1Q9Y5F3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHB1Q9Y5F3 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB1Q9Y5F3 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB1Q9Y5F3 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHB1Q9Y5F3 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PCDHB1Q9Y5F3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHB1Q9Y5F3 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB1Q9Y5F3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB1Q9Y5F3 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB1Q9Y5F3 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
PCDHB1Q9Y5F3 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB1Q9Y5F3 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB1Q9Y5F3 MIR1909-201ENST00000411312 80 ntBASIC15.73■□□□□ 0.11
PCDHB1Q9Y5F3 AZGP1P1-201ENST00000411909 902 ntBASIC15.73■□□□□ 0.11
PCDHB1Q9Y5F3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PCDHB1Q9Y5F3 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PCDHB1Q9Y5F3 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PCDHB1Q9Y5F3 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.73■□□□□ 0.11
PCDHB1Q9Y5F3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
PCDHB1Q9Y5F3 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.73■□□□□ 0.11
PCDHB1Q9Y5F3 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB1Q9Y5F3 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB1Q9Y5F3 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB1Q9Y5F3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB1Q9Y5F3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB1Q9Y5F3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PCDHB1Q9Y5F3 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PCDHB1Q9Y5F3 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
PCDHB1Q9Y5F3 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.73■□□□□ 0.11
PCDHB1Q9Y5F3 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PCDHB1Q9Y5F3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHB1Q9Y5F3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHB1Q9Y5F3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB1Q9Y5F3 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB1Q9Y5F3 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB1Q9Y5F3 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
PCDHB1Q9Y5F3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHB1Q9Y5F3 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
PCDHB1Q9Y5F3 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHB1Q9Y5F3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHB1Q9Y5F3 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.72■□□□□ 0.11
PCDHB1Q9Y5F3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHB1Q9Y5F3 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHB1Q9Y5F3 CICP13-201ENST00000422015 2789 ntBASIC15.72■□□□□ 0.11
PCDHB1Q9Y5F3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHB1Q9Y5F3 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDHB1Q9Y5F3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHB1Q9Y5F3 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHB1Q9Y5F3 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PCDHB1Q9Y5F3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDHB1Q9Y5F3 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHB1Q9Y5F3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PCDHB1Q9Y5F3 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDHB1Q9Y5F3 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDHB1Q9Y5F3 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHB1Q9Y5F3 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHB1Q9Y5F3 AC079776.1-201ENST00000401540 1152 ntBASIC15.72■□□□□ 0.11
PCDHB1Q9Y5F3 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.72■□□□□ 0.11
PCDHB1Q9Y5F3 AC136604.1-201ENST00000418535 575 ntBASIC15.72■□□□□ 0.11
PCDHB1Q9Y5F3 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.72■□□□□ 0.11
PCDHB1Q9Y5F3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHB1Q9Y5F3 ACA64.2-201ENST00000459014 129 ntBASIC15.72■□□□□ 0.11
PCDHB1Q9Y5F3 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHB1Q9Y5F3 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHB1Q9Y5F3 SPDYE18-201ENST00000510091 1050 ntBASIC15.72■□□□□ 0.11
PCDHB1Q9Y5F3 DOC2GP-202ENST00000514950 1163 ntBASIC15.72■□□□□ 0.11
PCDHB1Q9Y5F3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHB1Q9Y5F3 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PCDHB1Q9Y5F3 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHB1Q9Y5F3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHB1Q9Y5F3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms