Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SALL1Q9NSC2 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.8■□□□□ 0.6
SALL1Q9NSC2 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SALL1Q9NSC2 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SALL1Q9NSC2 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.8■□□□□ 0.6
SALL1Q9NSC2 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SALL1Q9NSC2 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SALL1Q9NSC2 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SALL1Q9NSC2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SALL1Q9NSC2 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.79■□□□□ 0.6
SALL1Q9NSC2 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SALL1Q9NSC2 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.79■□□□□ 0.6
SALL1Q9NSC2 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SALL1Q9NSC2 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SALL1Q9NSC2 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.79■□□□□ 0.6
SALL1Q9NSC2 STX1A-203ENST00000395155 783 ntTSL 2 BASIC18.79■□□□□ 0.6
SALL1Q9NSC2 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC18.79■□□□□ 0.6
SALL1Q9NSC2 FTH1P14-201ENST00000482930 551 ntBASIC18.79■□□□□ 0.6
SALL1Q9NSC2 MFF-223ENST00000524634 647 ntTSL 2 BASIC18.79■□□□□ 0.6
SALL1Q9NSC2 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC18.79■□□□□ 0.6
SALL1Q9NSC2 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SALL1Q9NSC2 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC18.79■□□□□ 0.6
SALL1Q9NSC2 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SALL1Q9NSC2 GPR39-203ENST00000622084 900 ntTSL 5 BASIC18.79■□□□□ 0.6
SALL1Q9NSC2 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SALL1Q9NSC2 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SALL1Q9NSC2 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SALL1Q9NSC2 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SALL1Q9NSC2 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.79■□□□□ 0.6
SALL1Q9NSC2 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SALL1Q9NSC2 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SALL1Q9NSC2 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SALL1Q9NSC2 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SALL1Q9NSC2 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SALL1Q9NSC2 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SALL1Q9NSC2 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SALL1Q9NSC2 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SALL1Q9NSC2 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SALL1Q9NSC2 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SALL1Q9NSC2 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SALL1Q9NSC2 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SALL1Q9NSC2 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
SALL1Q9NSC2 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SALL1Q9NSC2 PGGT1BP2-201ENST00000398621 1028 ntBASIC18.78■□□□□ 0.6
SALL1Q9NSC2 MPV17-206ENST00000402722 827 ntTSL 3 BASIC18.78■□□□□ 0.6
SALL1Q9NSC2 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.78■□□□□ 0.6
SALL1Q9NSC2 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18.78■□□□□ 0.6
SALL1Q9NSC2 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
SALL1Q9NSC2 BNIP3P42-201ENST00000454982 569 ntBASIC18.78■□□□□ 0.6
SALL1Q9NSC2 FO681548.1-201ENST00000455617 1132 ntBASIC18.78■□□□□ 0.6
SALL1Q9NSC2 BNIP3P29-201ENST00000598302 571 ntBASIC18.78■□□□□ 0.6
SALL1Q9NSC2 AC011447.5-201ENST00000616168 564 ntBASIC18.78■□□□□ 0.6
SALL1Q9NSC2 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SALL1Q9NSC2 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.78■□□□□ 0.6
SALL1Q9NSC2 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.78■□□□□ 0.6
SALL1Q9NSC2 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SALL1Q9NSC2 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SALL1Q9NSC2 AL138799.1-201ENST00000448213 1675 ntBASIC18.78■□□□□ 0.6
SALL1Q9NSC2 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SALL1Q9NSC2 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SALL1Q9NSC2 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SALL1Q9NSC2 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SALL1Q9NSC2 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.78■□□□□ 0.6
SALL1Q9NSC2 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SALL1Q9NSC2 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SALL1Q9NSC2 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SALL1Q9NSC2 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.78■□□□□ 0.6
SALL1Q9NSC2 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SALL1Q9NSC2 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SALL1Q9NSC2 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.77■□□□□ 0.6
SALL1Q9NSC2 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SALL1Q9NSC2 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SALL1Q9NSC2 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC18.77■□□□□ 0.6
SALL1Q9NSC2 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SALL1Q9NSC2 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SALL1Q9NSC2 AC099336.1-201ENST00000417053 1171 ntBASIC18.77■□□□□ 0.6
SALL1Q9NSC2 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SALL1Q9NSC2 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SALL1Q9NSC2 AC007551.1-201ENST00000457394 519 ntBASIC18.77■□□□□ 0.6
SALL1Q9NSC2 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SALL1Q9NSC2 KSR1-207ENST00000578981 748 ntTSL 4 BASIC18.77■□□□□ 0.6
SALL1Q9NSC2 AP005019.2-201ENST00000615104 511 ntBASIC18.77■□□□□ 0.6
SALL1Q9NSC2 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SALL1Q9NSC2 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SALL1Q9NSC2 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.77■□□□□ 0.6
SALL1Q9NSC2 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SALL1Q9NSC2 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SALL1Q9NSC2 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SALL1Q9NSC2 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SALL1Q9NSC2 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SALL1Q9NSC2 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SALL1Q9NSC2 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SALL1Q9NSC2 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SALL1Q9NSC2 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SALL1Q9NSC2 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SALL1Q9NSC2 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SALL1Q9NSC2 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SALL1Q9NSC2 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SALL1Q9NSC2 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SALL1Q9NSC2 AC092384.3-202ENST00000564646 2873 ntBASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms