Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
C12orf4Q9NQ89 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
C12orf4Q9NQ89 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
C12orf4Q9NQ89 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
C12orf4Q9NQ89 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 KRT18P27-201ENST00000427733 1299 ntBASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 MIR1199-201ENST00000621445 119 ntBASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 AC027612.1-201ENST00000445234 2395 ntBASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 AL592424.1-201ENST00000563624 1536 ntBASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
C12orf4Q9NQ89 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 AC012569.1-201ENST00000591191 1524 ntBASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 UPK3BP1-201ENST00000428678 509 ntBASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 PRR29-207ENST00000580752 458 ntTSL 3 BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 AL445228.2-201ENST00000605589 952 ntBASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 AC008667.4-201ENST00000607370 168 ntBASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.82□□□□□ -0.2
C12orf4Q9NQ89 U82695.1-201ENST00000635752 1889 ntBASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms