Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 LINC00895-201ENST00000629028 1637 ntBASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 AL139400.1-201ENST00000366220 510 ntBASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 AC069335.1-201ENST00000489972 472 ntBASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 AC093520.2-201ENST00000561830 333 ntBASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 AL355385.1-201ENST00000606123 409 ntBASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 AC008267.7-201ENST00000624570 1194 ntBASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 AC005912.2-201ENST00000619492 2400 ntBASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 AL645728.1-201ENST00000366221 2101 ntBASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 AC079781.5-202ENST00000641784 3743 ntBASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TIMMDC1Q9NPL8 FLJ16779-201ENST00000612722 7638 ntBASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 CYMP-203ENST00000474680 1263 ntBASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 AC106028.4-201ENST00000614509 607 ntBASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.24■□□□□ 0.03
TIMMDC1Q9NPL8 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms