Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIPK3Q9H422 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIPK3Q9H422 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.1■□□□□ 0.33
HIPK3Q9H422 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIPK3Q9H422 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.1■□□□□ 0.33
HIPK3Q9H422 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
HIPK3Q9H422 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HIPK3Q9H422 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HIPK3Q9H422 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIPK3Q9H422 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIPK3Q9H422 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.09■□□□□ 0.33
HIPK3Q9H422 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
HIPK3Q9H422 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
HIPK3Q9H422 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HIPK3Q9H422 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HIPK3Q9H422 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HIPK3Q9H422 AC018892.3-201ENST00000623986 2499 ntBASIC17.09■□□□□ 0.33
HIPK3Q9H422 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HIPK3Q9H422 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HIPK3Q9H422 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HIPK3Q9H422 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HIPK3Q9H422 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HIPK3Q9H422 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HIPK3Q9H422 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.09■□□□□ 0.33
HIPK3Q9H422 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HIPK3Q9H422 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.09■□□□□ 0.33
HIPK3Q9H422 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
HIPK3Q9H422 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.09■□□□□ 0.33
HIPK3Q9H422 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.09■□□□□ 0.33
HIPK3Q9H422 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.09■□□□□ 0.33
HIPK3Q9H422 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.09■□□□□ 0.33
HIPK3Q9H422 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.09■□□□□ 0.33
HIPK3Q9H422 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.09■□□□□ 0.33
HIPK3Q9H422 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.09■□□□□ 0.33
HIPK3Q9H422 AC105129.2-201ENST00000559536 390 ntBASIC17.09■□□□□ 0.33
HIPK3Q9H422 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC17.09■□□□□ 0.33
HIPK3Q9H422 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HIPK3Q9H422 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.09■□□□□ 0.33
HIPK3Q9H422 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.09■□□□□ 0.33
HIPK3Q9H422 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HIPK3Q9H422 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HIPK3Q9H422 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.09■□□□□ 0.33
HIPK3Q9H422 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HIPK3Q9H422 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.09■□□□□ 0.33
HIPK3Q9H422 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.09■□□□□ 0.33
HIPK3Q9H422 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
HIPK3Q9H422 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.09■□□□□ 0.33
HIPK3Q9H422 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.09■□□□□ 0.33
HIPK3Q9H422 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.09■□□□□ 0.33
HIPK3Q9H422 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HIPK3Q9H422 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HIPK3Q9H422 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
HIPK3Q9H422 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HIPK3Q9H422 AL162727.3-201ENST00000635661 2787 ntBASIC17.09■□□□□ 0.33
HIPK3Q9H422 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HIPK3Q9H422 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HIPK3Q9H422 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
HIPK3Q9H422 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HIPK3Q9H422 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HIPK3Q9H422 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
HIPK3Q9H422 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HIPK3Q9H422 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
HIPK3Q9H422 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.08■□□□□ 0.32
HIPK3Q9H422 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HIPK3Q9H422 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HIPK3Q9H422 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HIPK3Q9H422 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.08■□□□□ 0.32
HIPK3Q9H422 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HIPK3Q9H422 MIR663B-201ENST00000408361 115 ntBASIC17.08■□□□□ 0.32
HIPK3Q9H422 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.08■□□□□ 0.32
HIPK3Q9H422 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC17.08■□□□□ 0.32
HIPK3Q9H422 UPF3AP2-201ENST00000457924 1132 ntBASIC17.08■□□□□ 0.32
HIPK3Q9H422 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.08■□□□□ 0.32
HIPK3Q9H422 ECM1P1-201ENST00000604092 1279 ntBASIC17.08■□□□□ 0.32
HIPK3Q9H422 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.32
HIPK3Q9H422 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HIPK3Q9H422 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HIPK3Q9H422 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
HIPK3Q9H422 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HIPK3Q9H422 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HIPK3Q9H422 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HIPK3Q9H422 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HIPK3Q9H422 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HIPK3Q9H422 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HIPK3Q9H422 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HIPK3Q9H422 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HIPK3Q9H422 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HIPK3Q9H422 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HIPK3Q9H422 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
HIPK3Q9H422 AL354989.2-201ENST00000435838 1540 ntBASIC17.07■□□□□ 0.32
HIPK3Q9H422 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HIPK3Q9H422 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
HIPK3Q9H422 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HIPK3Q9H422 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HIPK3Q9H422 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HIPK3Q9H422 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HIPK3Q9H422 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HIPK3Q9H422 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HIPK3Q9H422 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HIPK3Q9H422 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms