Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC18.86■□□□□ 0.61
RTFDC1Q9BY42 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC18.86■□□□□ 0.61
RTFDC1Q9BY42 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RTFDC1Q9BY42 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC18.86■□□□□ 0.61
RTFDC1Q9BY42 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RTFDC1Q9BY42 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTFDC1Q9BY42 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC18.86■□□□□ 0.61
RTFDC1Q9BY42 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC18.86■□□□□ 0.61
RTFDC1Q9BY42 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC18.86■□□□□ 0.61
RTFDC1Q9BY42 AC244157.2-201ENST00000616239 1006 ntBASIC18.86■□□□□ 0.61
RTFDC1Q9BY42 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTFDC1Q9BY42 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RTFDC1Q9BY42 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTFDC1Q9BY42 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTFDC1Q9BY42 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RTFDC1Q9BY42 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTFDC1Q9BY42 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RTFDC1Q9BY42 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RTFDC1Q9BY42 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.86■□□□□ 0.61
RTFDC1Q9BY42 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTFDC1Q9BY42 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RTFDC1Q9BY42 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 RPS15-201ENST00000233609 534 ntTSL 2 BASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 AL645937.2-201ENST00000396808 931 ntBASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 AL139094.1-201ENST00000405549 1188 ntBASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 TISP43-201ENST00000409793 538 ntTSL 4 BASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 KRTAP19-9P-201ENST00000421795 191 ntBASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 RN7SL769P-201ENST00000469386 295 ntBASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 RPS15-205ENST00000586686 562 ntTSL 5 BASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 RPS15-208ENST00000591804 711 ntTSL 5 BASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 NDUFV2P1-201ENST00000596415 907 ntBASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 KLK11-210ENST00000600362 759 ntTSL 3 BASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 AC069224.1-201ENST00000566372 1715 ntBASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.85■□□□□ 0.61
RTFDC1Q9BY42 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RTFDC1Q9BY42 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTFDC1Q9BY42 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTFDC1Q9BY42 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.84■□□□□ 0.61
RTFDC1Q9BY42 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTFDC1Q9BY42 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTFDC1Q9BY42 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
RTFDC1Q9BY42 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RTFDC1Q9BY42 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTFDC1Q9BY42 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTFDC1Q9BY42 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTFDC1Q9BY42 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RTFDC1Q9BY42 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC18.84■□□□□ 0.61
RTFDC1Q9BY42 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC18.84■□□□□ 0.61
RTFDC1Q9BY42 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC18.84■□□□□ 0.61
RTFDC1Q9BY42 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RTFDC1Q9BY42 HCG18-245ENST00000602550 559 ntTSL 4 BASIC18.84■□□□□ 0.61
RTFDC1Q9BY42 DIO1-215ENST00000610607 796 ntTSL 5 BASIC18.84■□□□□ 0.61
RTFDC1Q9BY42 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTFDC1Q9BY42 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
RTFDC1Q9BY42 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.84■□□□□ 0.61
RTFDC1Q9BY42 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RTFDC1Q9BY42 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTFDC1Q9BY42 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
RTFDC1Q9BY42 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RTFDC1Q9BY42 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
RTFDC1Q9BY42 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTFDC1Q9BY42 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTFDC1Q9BY42 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RTFDC1Q9BY42 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.83■□□□□ 0.61
RTFDC1Q9BY42 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RTFDC1Q9BY42 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RTFDC1Q9BY42 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RTFDC1Q9BY42 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
RTFDC1Q9BY42 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RTFDC1Q9BY42 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
RTFDC1Q9BY42 SMS-201ENST00000379404 1174 ntTSL 3 BASIC18.83■□□□□ 0.6
RTFDC1Q9BY42 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RTFDC1Q9BY42 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms