Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 AC013726.1-201ENST00000563747 2285 ntBASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 KRT18P3-201ENST00000451602 1288 ntBASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 HNRNPUP1-201ENST00000554987 333 ntBASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 KRT8P23-201ENST00000560090 1207 ntBASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 AC027601.4-201ENST00000611259 610 ntBASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 CAND2-206ENST00000626378 333 ntTSL 5 BASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 AC007292.2-201ENST00000593524 1812 ntBASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SHANK2-AS3Q9BTD1 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
SHANK2-AS3Q9BTD1 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
SHANK2-AS3Q9BTD1 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
SHANK2-AS3Q9BTD1 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
SHANK2-AS3Q9BTD1 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SHANK2-AS3Q9BTD1 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
SHANK2-AS3Q9BTD1 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
SHANK2-AS3Q9BTD1 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 AL136379.1-201ENST00000623471 2642 ntBASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 AC026396.1-201ENST00000419388 421 ntBASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 ADH5P3-201ENST00000433842 1137 ntBASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 FAM58CP-201ENST00000435741 640 ntBASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 SPDYE11-202ENST00000450699 704 ntBASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 IGHV3-62-201ENST00000520057 340 ntBASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 MAX-210ENST00000555419 765 ntTSL 5 BASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 AC243562.1-201ENST00000560672 389 ntBASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 SPDYE9P-201ENST00000570642 692 ntBASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 NAA38-207ENST00000576861 556 ntTSL 3 BASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 AC097359.3-201ENST00000603982 1210 ntBASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 AC140113.2-201ENST00000604370 208 ntBASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 SPDYE10P-202ENST00000612005 668 ntBASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 SPDYE8P-202ENST00000612377 668 ntBASIC12.14□□□□□ -0.47
SHANK2-AS3Q9BTD1 FAM197Y3-203ENST00000618346 717 ntBASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms