Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CCDC33Q8N5R6 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC33Q8N5R6 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC33Q8N5R6 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC33Q8N5R6 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC33Q8N5R6 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.57■□□□□ 0.24
CCDC33Q8N5R6 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
CCDC33Q8N5R6 AL512361.1-201ENST00000554200 418 ntBASIC16.57■□□□□ 0.24
CCDC33Q8N5R6 AC044860.1-202ENST00000559481 777 ntBASIC16.57■□□□□ 0.24
CCDC33Q8N5R6 AC140912.1-201ENST00000577171 1054 ntBASIC16.57■□□□□ 0.24
CCDC33Q8N5R6 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.57■□□□□ 0.24
CCDC33Q8N5R6 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC33Q8N5R6 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.57■□□□□ 0.24
CCDC33Q8N5R6 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC33Q8N5R6 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CCDC33Q8N5R6 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CCDC33Q8N5R6 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC33Q8N5R6 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
CCDC33Q8N5R6 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC33Q8N5R6 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC33Q8N5R6 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC33Q8N5R6 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC33Q8N5R6 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC33Q8N5R6 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CCDC33Q8N5R6 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC33Q8N5R6 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC33Q8N5R6 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC33Q8N5R6 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC33Q8N5R6 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC33Q8N5R6 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
CCDC33Q8N5R6 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC33Q8N5R6 AC138969.3-201ENST00000546612 1459 ntBASIC16.56■□□□□ 0.24
CCDC33Q8N5R6 AC138932.2-201ENST00000548268 1459 ntBASIC16.56■□□□□ 0.24
CCDC33Q8N5R6 AC126755.4-201ENST00000549796 1459 ntBASIC16.56■□□□□ 0.24
CCDC33Q8N5R6 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC33Q8N5R6 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.56■□□□□ 0.24
CCDC33Q8N5R6 SPDYE19P-201ENST00000338590 713 ntBASIC16.56■□□□□ 0.24
CCDC33Q8N5R6 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC33Q8N5R6 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.56■□□□□ 0.24
CCDC33Q8N5R6 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC33Q8N5R6 AC104640.1-201ENST00000562617 2109 ntBASIC16.56■□□□□ 0.24
CCDC33Q8N5R6 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.56■□□□□ 0.24
CCDC33Q8N5R6 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.56■□□□□ 0.24
CCDC33Q8N5R6 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.56■□□□□ 0.24
CCDC33Q8N5R6 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC33Q8N5R6 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC33Q8N5R6 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.56■□□□□ 0.24
CCDC33Q8N5R6 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.56■□□□□ 0.24
CCDC33Q8N5R6 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC33Q8N5R6 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC33Q8N5R6 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC33Q8N5R6 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC33Q8N5R6 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC33Q8N5R6 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC33Q8N5R6 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC33Q8N5R6 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC33Q8N5R6 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC33Q8N5R6 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC33Q8N5R6 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC33Q8N5R6 BNIP3P1-202ENST00000550043 1585 ntBASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 DGCR5-201ENST00000399539 862 ntBASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 AL359881.2-201ENST00000602973 570 ntBASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC33Q8N5R6 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms