Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
ARHGEF39Q8N4T4 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ARHGEF39Q8N4T4 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ARHGEF39Q8N4T4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.78□□□□□ -0.04
ARHGEF39Q8N4T4 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ARHGEF39Q8N4T4 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ARHGEF39Q8N4T4 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.77□□□□□ -0.04
ARHGEF39Q8N4T4 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ARHGEF39Q8N4T4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ARHGEF39Q8N4T4 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
ARHGEF39Q8N4T4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ARHGEF39Q8N4T4 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.77□□□□□ -0.04
ARHGEF39Q8N4T4 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
ARHGEF39Q8N4T4 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.77□□□□□ -0.04
ARHGEF39Q8N4T4 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.77□□□□□ -0.04
ARHGEF39Q8N4T4 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ARHGEF39Q8N4T4 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
ARHGEF39Q8N4T4 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
ARHGEF39Q8N4T4 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
ARHGEF39Q8N4T4 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ARHGEF39Q8N4T4 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ARHGEF39Q8N4T4 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.77□□□□□ -0.05
ARHGEF39Q8N4T4 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.77□□□□□ -0.05
ARHGEF39Q8N4T4 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
ARHGEF39Q8N4T4 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.77□□□□□ -0.05
ARHGEF39Q8N4T4 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.77□□□□□ -0.05
ARHGEF39Q8N4T4 VDAC1P7-201ENST00000462417 847 ntBASIC14.77□□□□□ -0.05
ARHGEF39Q8N4T4 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.77□□□□□ -0.05
ARHGEF39Q8N4T4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
ARHGEF39Q8N4T4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
ARHGEF39Q8N4T4 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.77□□□□□ -0.05
ARHGEF39Q8N4T4 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
ARHGEF39Q8N4T4 AC020658.6-201ENST00000623564 1870 ntBASIC14.77□□□□□ -0.05
ARHGEF39Q8N4T4 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ARHGEF39Q8N4T4 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ARHGEF39Q8N4T4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ARHGEF39Q8N4T4 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ARHGEF39Q8N4T4 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ARHGEF39Q8N4T4 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ARHGEF39Q8N4T4 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ARHGEF39Q8N4T4 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
ARHGEF39Q8N4T4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ARHGEF39Q8N4T4 INTS4P2-202ENST00000614726 2019 ntBASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 AL139384.1-201ENST00000612143 3047 ntBASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 AP006294.1-201ENST00000415407 339 ntBASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 AL359711.2-201ENST00000563105 872 ntBASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 AC120045.2-201ENST00000567334 178 ntBASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 AC025181.2-201ENST00000606994 802 ntBASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ARHGEF39Q8N4T4 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
ARHGEF39Q8N4T4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms