Protein–RNA interactions for Protein: Q86XW9

NME9, Thioredoxin domain-containing protein 6, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME9Q86XW9 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
NME9Q86XW9 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
NME9Q86XW9 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NME9Q86XW9 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NME9Q86XW9 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NME9Q86XW9 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.98■□□□□ 0.95
NME9Q86XW9 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC20.98■□□□□ 0.95
NME9Q86XW9 ILF3-AS1-201ENST00000591501 1983 ntBASIC20.98■□□□□ 0.95
NME9Q86XW9 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NME9Q86XW9 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC20.98■□□□□ 0.95
NME9Q86XW9 AMT-224ENST00000635808 1610 ntTSL 5 BASIC20.98■□□□□ 0.95
NME9Q86XW9 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NME9Q86XW9 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC20.98■□□□□ 0.95
NME9Q86XW9 PFN1P12-201ENST00000455938 534 ntBASIC20.98■□□□□ 0.95
NME9Q86XW9 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC20.98■□□□□ 0.95
NME9Q86XW9 RNA5SP486-201ENST00000515961 83 ntBASIC20.98■□□□□ 0.95
NME9Q86XW9 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NME9Q86XW9 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NME9Q86XW9 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC20.98■□□□□ 0.95
NME9Q86XW9 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
NME9Q86XW9 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NME9Q86XW9 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NME9Q86XW9 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NME9Q86XW9 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
NME9Q86XW9 AL139384.1-201ENST00000612143 3047 ntBASIC20.98■□□□□ 0.95
NME9Q86XW9 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NME9Q86XW9 AHCYP2-201ENST00000430630 1300 ntBASIC20.98■□□□□ 0.95
NME9Q86XW9 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
NME9Q86XW9 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
NME9Q86XW9 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NME9Q86XW9 AC009090.5-201ENST00000624886 2285 ntBASIC20.97■□□□□ 0.95
NME9Q86XW9 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.97■□□□□ 0.95
NME9Q86XW9 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC20.97■□□□□ 0.95
NME9Q86XW9 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NME9Q86XW9 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NME9Q86XW9 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NME9Q86XW9 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
NME9Q86XW9 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
NME9Q86XW9 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
NME9Q86XW9 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC20.97■□□□□ 0.95
NME9Q86XW9 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
NME9Q86XW9 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NME9Q86XW9 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NME9Q86XW9 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC20.97■□□□□ 0.95
NME9Q86XW9 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC20.97■□□□□ 0.95
NME9Q86XW9 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC20.97■□□□□ 0.95
NME9Q86XW9 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC20.97■□□□□ 0.95
NME9Q86XW9 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC20.97■□□□□ 0.95
NME9Q86XW9 AL118558.3-201ENST00000607414 1079 ntBASIC20.97■□□□□ 0.95
NME9Q86XW9 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC20.97■□□□□ 0.95
NME9Q86XW9 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC20.97■□□□□ 0.95
NME9Q86XW9 PRSS30P-206ENST00000641773 873 ntBASIC20.97■□□□□ 0.95
NME9Q86XW9 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
NME9Q86XW9 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NME9Q86XW9 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NME9Q86XW9 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC20.97■□□□□ 0.95
NME9Q86XW9 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NME9Q86XW9 ACE-203ENST00000413513 2237 ntTSL 2 BASIC20.97■□□□□ 0.95
NME9Q86XW9 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
NME9Q86XW9 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NME9Q86XW9 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NME9Q86XW9 AC127383.1-201ENST00000444697 1800 ntBASIC20.97■□□□□ 0.95
NME9Q86XW9 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
NME9Q86XW9 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC20.97■□□□□ 0.95
NME9Q86XW9 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NME9Q86XW9 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NME9Q86XW9 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NME9Q86XW9 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC20.96■□□□□ 0.95
NME9Q86XW9 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
NME9Q86XW9 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
NME9Q86XW9 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC20.96■□□□□ 0.95
NME9Q86XW9 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
NME9Q86XW9 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
NME9Q86XW9 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
NME9Q86XW9 AC092127.1-201ENST00000567093 3455 ntBASIC20.96■□□□□ 0.95
NME9Q86XW9 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC20.96■□□□□ 0.95
NME9Q86XW9 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NME9Q86XW9 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NME9Q86XW9 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC20.96■□□□□ 0.95
NME9Q86XW9 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NME9Q86XW9 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NME9Q86XW9 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC20.96■□□□□ 0.95
NME9Q86XW9 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NME9Q86XW9 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NME9Q86XW9 ACR-203ENST00000529621 708 ntTSL 5 BASIC20.96■□□□□ 0.95
NME9Q86XW9 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
NME9Q86XW9 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC20.96■□□□□ 0.95
NME9Q86XW9 PRKN-211ENST00000615065 261 ntTSL 5 BASIC20.96■□□□□ 0.95
NME9Q86XW9 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC20.96■□□□□ 0.95
NME9Q86XW9 AC006453.4-201ENST00000636949 1252 ntBASIC20.96■□□□□ 0.95
NME9Q86XW9 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NME9Q86XW9 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.96■□□□□ 0.95
NME9Q86XW9 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NME9Q86XW9 AC084364.1-201ENST00000551967 1556 ntBASIC20.96■□□□□ 0.95
NME9Q86XW9 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
NME9Q86XW9 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NME9Q86XW9 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NME9Q86XW9 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
NME9Q86XW9 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
NME9Q86XW9 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms